RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 IGHV4-39P01824 125 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 EFNA4P52798 201 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 RPL8P62917 257 aaKnown RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 CBLN2Q8IUK8 224 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 ZNF843Q8N446 348 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 EIF4E3Q8N5X7 224 aaKnown RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 OR4P4Q8NGL7 312 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 OR10G4Q8NGN3 311 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 OR10G9Q8NGN4 311 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 OR10G7Q8NGN6 311 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 ACY3Q96HD9 319 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 RCC1LQ96I51 464 aaKnown RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 TMEM147Q9BVK8 224 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 NPCDR1Q9BY65 106 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 TMEM14BQ9NUH8 114 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 SLC39A9Q9NUM3 307 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 WASHC3Q9Y3C0 194 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 M0R036 132 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 IGLV1-47P01700 117 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 SNRNP70P08621 437 aaKnown RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 DVL1P1P54792 670 aaPredicted RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 UBE2G2P60604 165 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 RAB11AP62491 216 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 PDLIM3Q53GG5 364 aaPredicted RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 ARSJQ5FYB0 599 aaPredicted RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 ZNF787Q6DD87 383 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 HIST2H2BCQ6DN03 193 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 TREML4Q6UXN2 200 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 IL34Q6ZMJ4 242 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 VMO1Q7Z5L0 202 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 DYNAPQ8N1N2 210 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 OR2T6Q8NHC8 308 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 CLDND2Q8NHS1 167 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 SUN5Q8TC36 379 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 CCL19Q99731 98 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 METTL1Q9UBP6 276 aaKnown RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 GAB2Q9UQC2 676 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 S4R3C0 116 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 NOTCH2Q04721 2471 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 A0A1B0GW64 132 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 hCG_1809904A0A1W2PP81 198 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 A0A1W2PPE2 198 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 A0A1W2PPH5 198 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 A0A1W2PR64 198 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 A0A1W2PRV1 198 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 MAP1LC3B2A6NCE7 125 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 RBFOX3A6NFN3 312 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 SH2D7A6NKC9 451 aaPredicted RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 NCBP2LA6PVI3 153 aaKnown RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 UMAD1C9J7I0 102 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 AREGP15514 252 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 IGFBP2P18065 325 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 IL3RAP26951 378 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 HTR1DP28221 377 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 RAB5CP51148 216 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 ATP5J2P56134 94 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 TLE4Q04727 773 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 WT1-ASQ06250 92 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 MMDQ15546 238 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 ZNF429Q86V71 674 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 OSR1Q8TAX0 266 aaPredicted RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 NKX6-2Q9C056 277 aaPredicted RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 MAP1LC3BQ9GZQ8 125 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 GSX1Q9H4S2 264 aaPredicted RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 PRNDQ9UKY0 176 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 FOXA2Q9Y261 457 aaPredicted RBP2.77□□□□□ -1.97
LIG4-205ENST00000614526 TRIM77I1YAP6 450 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 CNIH1O95406 144 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 IGLV2-23P01705 113 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 HSPB1P04792 205 aaKnown RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 CD5P06127 495 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 PRB4P10163 310 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 OPRK1P41145 380 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 RPP30P78346 268 aaKnown RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 SSBP2P81877 361 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 PRCDQ00LT1 54 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 SRSF1Q07955 248 aaKnown RBP eCLIP2.76□□□□□ -1.97
LIG4-205ENST00000614526 PEA15Q15121 130 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 ZNF674Q2M3X9 581 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 VMA21Q3ZAQ7 101 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 KLF17Q5JT82 389 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 RUSC1-AS1Q66K80 236 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 CYB561D1Q8N8Q1 229 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 OR5T1Q8NG75 326 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 OR1L8Q8NGR8 309 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 ABHD5Q8WTS1 349 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 FAM216AQ8WUB2 273 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 RAB24Q969Q5 203 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 MISP3Q96FF7 219 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 MGST2Q99735 147 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 SCRT1Q9BWW7 348 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 RPS10P5Q9NQ39 176 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 DOK5Q9P104 306 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 SOX21Q9Y651 276 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 ANKRD17O75179 2603 aaKnown RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 SONP18583 2426 aaKnown RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 IGHV4-61A0A0C4DH41 118 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 A0A1W2PPI3 338 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 A0A1W2PPV4 95 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 CGB1A6NKQ9 187 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms