RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 SRSF7Q16629 238 aaKnown RBP eCLIP3.73□□□□□ -1.81
CDH8-205ENST00000577730 VKORC1L1Q8N0U8 176 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 MRAPQ8TCY5 172 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 COQ2Q96H96 371 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 YPEL2Q96QA6 119 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 RNF208Q9H0X6 261 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 HCSTQ9UBK5 93 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 MYH7P12883 1935 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 LOC102723996A0A087X1L8 192 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 GLRXP35754 106 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 SLC25A48Q6ZT89 311 aaKnown RBP3.73□□□□□ -1.81
CDH8-205ENST00000577730 CNEP1R1Q8N9A8 125 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 ZNF714Q96N38 554 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 MRPS17Q9Y2R5 130 aaKnown RBP3.73□□□□□ -1.81
CDH8-205ENST00000577730 SP9P0CG40 484 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 SPATA46Q5T0L3 261 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 INO80CQ6PI98 192 aaPredicted RBP3.73□□□□□ -1.81
CDH8-205ENST00000577730 PCSK4Q6UW60 755 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 Q6ZNB5 142 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 MOB3BQ86TA1 216 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 PAQR4Q8N4S7 273 aaPredicted RBP3.73□□□□□ -1.81
CDH8-205ENST00000577730 A0A0J9YW62 118 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 IGFBP6P24592 240 aaPredicted RBP3.73□□□□□ -1.81
CDH8-205ENST00000577730 YRDCQ86U90 279 aaKnown RBP3.73□□□□□ -1.81
CDH8-205ENST00000577730 CT55Q8WUE5 264 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 TMEM171Q8WVE6 324 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 C12orf49Q9H741 205 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 SIGLEC8Q9NYZ4 499 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 RNF115Q9Y4L5 304 aa3.73□□□□□ -1.81
CDH8-205ENST00000577730 MYH4Q9Y623 1939 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 NPIPB5A8MRT5 1133 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 MRPL23Q16540 153 aaKnown RBP3.72□□□□□ -1.81
CDH8-205ENST00000577730 ZC2HC1BQ5TFG8 222 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 ABHD12Q8N2K0 398 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 DRAM1Q8N682 238 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 DEFB119Q8N690 84 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 DEFB108BQ8NET1 73 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 MAFAQ8NHW3 353 aaPredicted RBP3.72□□□□□ -1.81
CDH8-205ENST00000577730 AKAP12Q02952 1782 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 IGKV1D-42A0A075B6H8 117 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 TDRG1Q3Y452 100 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 DUX4L9Q6RFH8 374 aaPredicted RBP3.72□□□□□ -1.81
CDH8-205ENST00000577730 CXorf67Q86X51 503 aaPredicted RBP3.72□□□□□ -1.81
CDH8-205ENST00000577730 PSG8Q9UQ74 426 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 KDM3BQ7LBC6 1761 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 PLCH1Q4KWH8 1693 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 MYH3P11055 1940 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 IGKV1D-16P01601 117 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 PATE4P0C8F1 98 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 HIST1H4AP62805 103 aaKnown RBP3.72□□□□□ -1.81
CDH8-205ENST00000577730 MCRIP2Q9BUT9 160 aaKnown RBP3.72□□□□□ -1.81
CDH8-205ENST00000577730 CCDC88AQ3V6T2 1871 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 AFDNP55196 1824 aaKnown RBP3.72□□□□□ -1.81
CDH8-205ENST00000577730 TRAV12-3A0A0B4J271 114 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 hCG_38984A0A1B0GV85 526 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 SYNGR3O43761 229 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 CCL2P13500 99 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 LDLRAD1Q5T700 205 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 FAM166AQ6J272 317 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 AMTNQ6UX39 209 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 ZNF721Q8TF20 911 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 V9GYY9 64 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 CAMTA1Q9Y6Y1 1673 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 A0A087WV48 116 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 LOC101059948A0A1B0GTJ6 334 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 PRSS29PA6NIE9 313 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 E9PQ18 207 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 IFI6P09912 130 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 DSCR4P56555 118 aaPredicted RBP3.72□□□□□ -1.81
CDH8-205ENST00000577730 LHX8Q68G74 356 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 OR11H6Q8NGC7 330 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 KIR2DL4Q99706 377 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 FZR1Q9UM11 496 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 NWD2Q9ULI1 1742 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 PRR32B1ATL7 298 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 H3BTX0 84 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 IFNL4K9M1U5 179 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 REG1BP48304 166 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 GNG5P63218 68 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 ZNF146Q15072 292 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 CT83Q5H943 113 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 SH2D6Q7Z4S9 175 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 WDR31Q8NA23 367 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 ATP6V0E2Q8NHE4 81 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 NPIPB3Q92617 1050 aa3.72□□□□□ -1.81
CDH8-205ENST00000577730 MYH1P12882 1939 aa3.71□□□□□ -1.81
CDH8-205ENST00000577730 A0A1W2PPV9 198 aa3.71□□□□□ -1.81
CDH8-205ENST00000577730 ZIC3O60481 467 aa3.71□□□□□ -1.81
CDH8-205ENST00000577730 LGALS1P09382 135 aaKnown RBP3.71□□□□□ -1.81
CDH8-205ENST00000577730 PLNP26678 52 aa3.71□□□□□ -1.81
CDH8-205ENST00000577730 SRD5A2P31213 254 aa3.71□□□□□ -1.81
CDH8-205ENST00000577730 SRSF1Q07955 248 aaKnown RBP eCLIP3.71□□□□□ -1.81
CDH8-205ENST00000577730 FAM53AQ6NSI3 398 aaPredicted RBP3.71□□□□□ -1.81
CDH8-205ENST00000577730 RPS19BP1Q86WX3 136 aaKnown RBP3.71□□□□□ -1.81
CDH8-205ENST00000577730 ZDHHC16Q969W1 377 aa3.71□□□□□ -1.81
CDH8-205ENST00000577730 R3HDMLQ9H3Y0 253 aa3.71□□□□□ -1.81
CDH8-205ENST00000577730 DECR2Q9NUI1 292 aa3.71□□□□□ -1.81
CDH8-205ENST00000577730 CCL26Q9Y258 94 aa3.71□□□□□ -1.81
CDH8-205ENST00000577730 LRP5O75197 1615 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms