RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	OR1J4	Q8NGS1	313 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR2K2	Q8NGT1	345 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	GPR119	Q8TDV5	335 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	TAF15	Q92804	592 aa	Known RBP eCLIP	3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	APOBEC3D	Q96AK3	386 aa	Predicted RBP	3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	RPUSD4	Q96CM3	377 aa	Known RBP	3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	NARS2	Q96I59	477 aa	Known RBP	3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	TEX37	Q96LM6	180 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR7D2	Q96RA2	312 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR52E6	Q96RD3	313 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	PITX2	Q99697	317 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	RARRES2	Q99969	163 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	HSPB9	Q9BQS6	159 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	TMEM126A	Q9H061	195 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	NANOG	Q9H9S0	305 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	CLCF1	Q9UBD9	225 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	ANXA10	Q9UJ72	324 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	MYO9A	B2RTY4	2548 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431		A0A1B0GV50	99 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431		A0A1B0GWB2	263 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431		A0A1B0GX51	115 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431		A0A1W2PQD3	144 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	MRAS	O14807	208 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	TNFSF13	O75888	250 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	KCNK2	O95069	426 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	EPPIN	O95925	133 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	APOA2	P02652	100 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	C1QB	P02746	253 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	PFN1	P07737	140 aa	Known RBP	3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	PGA4	P0DJD7	388 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	PGA3	P0DJD8	388 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	PGA5	P0DJD9	388 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	S100A11	P31949	105 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	GABRA3	P34903	492 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	MDH2	P40926	338 aa	Known RBP	3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	RPL35	P42766	123 aa	Known RBP	3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	EIF2B2	P49770	351 aa	Known RBP	3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	LHX2	P50458	406 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	GPM6A	P51674	278 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	AKR1D1	P51857	326 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF136	P52737	540 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	MFAP2	P55001	183 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	APOC4	P55056	127 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	DSCR4	P56555	118 aa	Predicted RBP	3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	KRTAP10-12	P60413	245 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	HBA1	P69905	142 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	SLC35A2	P78381	396 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	FUT5	Q11128	374 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	FBXL19-AS1	Q494R0	122 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	ATAD3C	Q5T2N8	411 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431		Q6ZVH6	145 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	MRPL55	Q7Z7F7	128 aa	Known RBP	3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	CROCCP2	Q86T23	111 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	CALHM3	Q86XJ0	350 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR52L1	Q8NGH7	329 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR51A2	Q8NGJ7	313 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	CANT1	Q8WVQ1	401 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	SULT4A1	Q9BR01	284 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	PDCD10	Q9BUL8	212 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	EMC6	Q9BV81	110 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	KRTAP4-3	Q9BYR4	195 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	SH3BGRL3	Q9H299	93 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	ISG20L2	Q9H9L3	353 aa	Known RBP	3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	NIT2	Q9NQR4	276 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	LYRM2	Q9NU23	88 aa	Predicted RBP	3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	AIG1	Q9NVV5	245 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	MARCO	Q9UEW3	520 aa	Predicted RBP	3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	GNG8	Q9UK08	70 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	KCNE3	Q9Y6H6	103 aa		3.1	□□□□□ -1.91
LRRC28-222	ENST00000561431	HCFC1	P51610	2035 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	PHF3	Q92576	2039 aa	Known RBP	3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	IGHV3-16	A0A0C4DH30	117 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	LOC100131303	A0A0U1RQF7	123 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	TEX50	A0A1B0GTY4	177 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	TRAPPC13	A5PLN9	417 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	LINC01619	G3V211	115 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	DEGS1	O15121	323 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	UPK1B	O75841	260 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	TTR	P02766	147 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	UBB	P0CG47	229 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	COX6B1	P14854	86 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	ATF1	P18846	271 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	KLK2	P20151	261 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	CDK2	P24941	298 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	FMO3	P31513	532 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	PFN2	P35080	140 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	NCALD	P61601	193 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	RPS28	P62857	69 aa	Known RBP	3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	MRPS10	P82664	201 aa	Known RBP	3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF117	Q03924	483 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF92	Q03936	586 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR8G1	Q15617	311 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	KCNJ8	Q15842	424 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	TAF9	Q16594	264 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	IAH1	Q2TAA2	248 aa	Predicted RBP	3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	CEACAM16	Q2WEN9	425 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	NHLRC3	Q5JS37	347 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	AKR1C8P	Q5T2L2	129 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	LINC00242	Q5T6M2	205 aa		3.09	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR2T5	Q6IEZ7	315 aa		3.09	□□□□□ -1.91

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