RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 MGAT4CQ9UBM8 478 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 ATRQ13535 2644 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 TRAV41A0A0B4J266 112 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 CLPSL1A2RUU4 121 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 CGB1A6NKQ9 187 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 TEX22C9J3V5 150 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 E7EUB6 86 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 MYOD1P15172 320 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 NKX2-1P43699 371 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-221ENST00000555773 ERHP84090 104 aaKnown RBP9.81□□□□□ -0.84
SHMT2-221ENST00000555773 SRSF2Q01130 221 aaKnown RBP9.81□□□□□ -0.84
SHMT2-221ENST00000555773 SRSF4Q08170 494 aaKnown RBP9.81□□□□□ -0.84
SHMT2-221ENST00000555773 IL15RAQ13261 267 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 FCN2Q15485 313 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 CXorf66Q5JRM2 361 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-221ENST00000555773 UNQ5815/PRO19632Q6UWF5 114 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 STPG2Q8N412 459 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 TTC9CQ8N5M4 171 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 LFNGQ8NES3 379 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 ASB13Q8WXK3 278 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 FAM103A1Q9BTL3 118 aaKnown RBP9.81□□□□□ -0.84
SHMT2-221ENST00000555773 HINT2Q9BX68 163 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 NMES1Q9C002 83 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 WNT10AQ9GZT5 417 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 PLEKHA3Q9HB20 300 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 ENY2Q9NPA8 101 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 FBXO7Q9Y3I1 522 aa9.81□□□□□ -0.84
SHMT2-221ENST00000555773 A0A1B0GW64 132 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 IGLC7A0M8Q6 106 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 TMEM89A2RUT3 159 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 HMX3A6NHT5 357 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 CEBPZOSA8MTT3 80 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 SIX6O95475 246 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 CRYGCP07315 174 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 SLC35B1P78383 322 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 C19orf54Q5BKX5 351 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 CENPVQ7Z7K6 275 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-221ENST00000555773 COMMD1Q8N668 190 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-221ENST00000555773 NOL4LQ96MY1 436 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-221ENST00000555773 CIB3Q96Q77 187 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-221ENST00000555773 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 WSB1Q9Y6I7 421 aa9.8□□□□□ -0.84
SHMT2-221ENST00000555773 PLXNB1O43157 2135 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 NPIPB5A8MRT5 1133 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 G3V318 75 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 SYNGR2O43760 224 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 BRI3O95415 125 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 OR13C7P0DN81 318 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 CXCL3P19876 107 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 PSMB6P28072 239 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 PPIFP30405 207 aaKnown RBP9.79□□□□□ -0.84
SHMT2-221ENST00000555773 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-221ENST00000555773 H2BFSP57053 126 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 ASPHD1Q5U4P2 390 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 OR2C3Q8N628 320 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 OR11H7Q8NGC8 314 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 OR10W1Q8NGF6 305 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 OR1L6Q8NGR2 347 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 FAM110DQ8TAY7 271 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-221ENST00000555773 DTD1Q8TEA8 209 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 TMEM158Q8WZ71 300 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 RBKSQ9H477 322 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 HEYLQ9NQ87 328 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-221ENST00000555773 LINC00527Q9UJ94 153 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 RNF114Q9Y508 228 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 CUBNO60494 3623 aa9.79□□□□□ -0.84
SHMT2-221ENST00000555773 PSMB11A5LHX3 300 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 H3BUA1 57 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 WRBO00258 174 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 CYB5BO43169 146 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 IGHG4P01861 327 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 MBPP02686 304 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-221ENST00000555773 RLN2P04090 185 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 AREGP15514 252 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 CTRB1P17538 263 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 SNCAP37840 140 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 HOXA1P49639 335 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-221ENST00000555773 SUB1P53999 127 aaKnown RBP eCLIP9.78□□□□□ -0.84
SHMT2-221ENST00000555773 CFHR3Q02985 330 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 WT1-ASQ06250 92 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 ECSCRQ19T08 205 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 TMEM95Q3KNT9 176 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 KRTAP24-1Q3LI83 254 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 CTRB2Q6GPI1 263 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 TEX38Q6PEX7 206 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 NOXA1Q86UR1 476 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 TAF15Q92804 592 aaKnown RBP eCLIP9.78□□□□□ -0.84
SHMT2-221ENST00000555773 RAB40CQ96S21 281 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 ZNF436Q9C0F3 470 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-221ENST00000555773 U3KQ87 197 aa9.78□□□□□ -0.84
SHMT2-221ENST00000555773 FBXO24O75426 580 aa9.77□□□□□ -0.85
SHMT2-221ENST00000555773 SCGB1D2O95969 90 aa9.77□□□□□ -0.85
SHMT2-221ENST00000555773 IGLV1-40P01703 118 aa9.77□□□□□ -0.85
SHMT2-221ENST00000555773 ELANEP08246 267 aa9.77□□□□□ -0.85
SHMT2-221ENST00000555773 GIPP09681 153 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-221ENST00000555773 MDKP21741 143 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-221ENST00000555773 HTR2BP41595 481 aa9.77□□□□□ -0.85
SHMT2-221ENST00000555773 RIPPLY3P57055 190 aa9.77□□□□□ -0.85
SHMT2-221ENST00000555773 PROK1P58294 105 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms