RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 TMEM183AQ8IXX5 376 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 OR2C3Q8N628 320 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 NUDCD2Q8WVJ2 157 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 ZNF256Q9Y2P7 627 aaPredicted RBP6.13□□□□□ -1.43
GNE-205ENST00000539815 PKD1L1Q8TDX9 2849 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 TRAV39A0A0B4J263 110 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 MEF2CQ06413 473 aaPredicted RBP6.13□□□□□ -1.43
GNE-205ENST00000539815 IL34Q6ZMJ4 242 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 ZNF788Q6ZQV5 615 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 MITD1Q8WV92 249 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 ZNF319Q9P2F9 582 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 LSM2Q9Y333 95 aaKnown RBP6.13□□□□□ -1.43
GNE-205ENST00000539815 K7EQM0 130 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 OR13C7P0DN81 318 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 RPL32P62910 135 aaKnown RBP6.13□□□□□ -1.43
GNE-205ENST00000539815 PMS2P11Q13670 270 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 HIST3H3Q16695 136 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 PRSS45Q7RTY3 260 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 SAMD12Q8N8I0 201 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 OR9G1Q8NH87 305 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 GLMPQ8WWB7 406 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 ST6GALNAC6Q969X2 333 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 PHYHIPLQ96FC7 376 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 PBDC1Q9BVG4 233 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 LPAR5Q9H1C0 372 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 PARP11Q9NR21 331 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 THYN1Q9P016 225 aa6.13□□□□□ -1.43
GNE-205ENST00000539815 TRBV4-1A0A0J9YWV2 114 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 TNFSF12O43508 249 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 TSPAN13O95857 204 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 CLDN12P56749 244 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 TAS2R30P59541 319 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 EIF5AP63241 154 aaKnown RBP6.12□□□□□ -1.43
GNE-205ENST00000539815 ECSCRQ19T08 205 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 ZNF626Q68DY1 528 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 ACOT7LQ6ZUV0 252 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 FAM58AQ8N1B3 248 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 TPRX1Q8N7U7 411 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 OR4D11Q8NGI4 311 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 RFESDQ8TAC1 157 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 RNF166Q96A37 237 aaPredicted RBP6.12□□□□□ -1.43
GNE-205ENST00000539815 AUNIPQ9H7T9 357 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 CKLFQ9UBR5 152 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 PSG8Q9UQ74 426 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 GAGE12BA1L429 117 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 OR7C1O76099 320 aaPredicted RBP6.12□□□□□ -1.43
GNE-205ENST00000539815 FSTL3O95633 263 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 OR5AC1P0C628 307 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 INSL3P51460 131 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 ELOBQ15370 118 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 CALHM1Q8IU99 346 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 OSR2Q8N2R0 312 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 KCNRGQ8N5I3 272 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 IQCF1Q8N6M8 205 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 ZC2HC1AQ96GY0 325 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 IL4I1Q96RQ9 567 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 TMEM133Q9H2Q1 129 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 FKBP11Q9NYL4 201 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 STRAPQ9Y3F4 350 aaKnown RBP6.12□□□□□ -1.43
GNE-205ENST00000539815 CSMD1Q96PZ7 3565 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 TRAV25A0A0B4J276 109 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 RBFOX2O43251 390 aaKnown RBP eCLIP6.12□□□□□ -1.43
GNE-205ENST00000539815 HAND1O96004 215 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 OR10J4P0C629 311 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 HINT1P49773 126 aaPredicted RBP6.12□□□□□ -1.43
GNE-205ENST00000539815 NIT1Q86X76 327 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 OR2T10Q8NGZ9 312 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 HSF4Q9ULV5 492 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 STAB2Q8WWQ8 2551 aa6.12□□□□□ -1.43
GNE-205ENST00000539815 OOSP1A8MZH6 123 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 PDE6DO43924 150 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 PRAF2O60831 178 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 IGHV3-7P01780 117 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 CD74P04233 296 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 FUT6P51993 359 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 ZNF322Q6U7Q0 402 aaPredicted RBP6.11□□□□□ -1.43
GNE-205ENST00000539815 LINC00114Q6XXX2 140 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 SPSB4Q96A44 273 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 ZNF488Q96MN9 340 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 EGLN3Q9H6Z9 239 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 MOB1AQ9H8S9 216 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 ABRACLQ9P1F3 81 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 TRAPPC2LQ9UL33 140 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 TMEM272A0A1B0GTI8 110 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 SH2D7A6NKC9 451 aaPredicted RBP6.11□□□□□ -1.43
GNE-205ENST00000539815 OVOL1O14753 267 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 SPIN3Q5JUX0 258 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 TEX36Q5VZQ5 186 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 TMEM200BQ69YZ2 307 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 ZNF770Q6IQ21 691 aaPredicted RBP6.11□□□□□ -1.43
GNE-205ENST00000539815 MSRB3Q8IXL7 192 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 OR52I1Q8NGK6 324 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 OR52I2Q8NH67 350 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 GABARAPL1Q9H0R8 117 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 UFC1Q9Y3C8 167 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 RNF222A6NCQ9 220 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 UMAD1C9J7I0 102 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 CDC42EP2O14613 210 aa6.11□□□□□ -1.43
GNE-205ENST00000539815 OTX1P32242 354 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms