RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CD3DP04234 171 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 IGKV1D-39P04432 117 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 HIST1H1BP16401 226 aaKnown RBP11.33□□□□□ -0.6
RAB40B-202ENST00000538809 PTBP1P26599 531 aaKnown RBP eCLIP11.33□□□□□ -0.6
RAB40B-202ENST00000538809 MECP2P51608 486 aaKnown RBP11.33□□□□□ -0.6
RAB40B-202ENST00000538809 TMBIM6P55061 237 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 ERVK-16P61578 105 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
RAB40B-202ENST00000538809 PHLDA2Q53GA4 152 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 FAM209BQ5JX69 171 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 SLC38A6Q8IZM9 456 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 CACNG8Q8WXS5 425 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 QTRT1Q9BXR0 403 aaKnown RBP11.33□□□□□ -0.6
RAB40B-202ENST00000538809 CCDC59Q9P031 241 aaKnown RBP11.33□□□□□ -0.6
RAB40B-202ENST00000538809 NSG2Q9Y328 171 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 RYR3Q15413 4870 aa11.33□□□□□ -0.6
RAB40B-202ENST00000538809 TEX50A0A1B0GTY4 177 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 TBPP20226 339 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 G6PCP35575 357 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 RPL5P46777 297 aaKnown RBP11.32□□□□□ -0.6
RAB40B-202ENST00000538809 RND3P61587 244 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 THOC7Q6I9Y2 204 aaKnown RBP11.32□□□□□ -0.6
RAB40B-202ENST00000538809 TBC1D26Q86UD7 250 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 ARRDC1Q8N5I2 433 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 C15orf40Q8WUR7 153 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 SEC22AQ96IW7 307 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 TM2D3Q9BRN9 247 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 PLEKHA3Q9HB20 300 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 NDUFA4L2Q9NRX3 87 aa11.32□□□□□ -0.6
RAB40B-202ENST00000538809 A8MZ25 164 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 GABARAPH6UMI1 98 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 KRASP01116 189 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 FOLR2P14207 255 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 GPR183P32249 361 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 CD81P60033 236 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 WT1-ASQ06250 92 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 RNASE10Q5GAN6 216 aaKnown RBP11.31□□□□□ -0.6
RAB40B-202ENST00000538809 TMEM229BQ8NBD8 167 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 OR4D10Q8NGI6 311 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 OR1L8Q8NGR8 309 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 OR2K2Q8NGT1 345 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 HINT2Q9BX68 163 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 WFDC10AQ9H1F0 79 aa11.31□□□□□ -0.6
RAB40B-202ENST00000538809 ZNF320A2RRD8 509 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 DBX1A6NMT0 343 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 H3BMQ9 156 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 LGALS9O00182 355 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 RGS5O15539 181 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 TRAPPC2P0DI81 140 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 TRAPPC2BP0DI82 140 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 OR13C7P0DN81 318 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 SSBP1Q04837 148 aaKnown RBP11.3□□□□□ -0.6
RAB40B-202ENST00000538809 GUCA2BQ16661 112 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 DEFB114Q30KQ6 69 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 HSD17B13Q7Z5P4 300 aaPredicted RBP11.3□□□□□ -0.6
RAB40B-202ENST00000538809 GDPD1Q8N9F7 314 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 MUC7Q8TAX7 377 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 SMIM4Q8WVI0 70 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 MRGPRFQ96AM1 343 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 ZNF486Q96H40 463 aaPredicted RBP11.3□□□□□ -0.6
RAB40B-202ENST00000538809 CXorf58Q96LI9 332 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
RAB40B-202ENST00000538809 TUBA4BQ9H853 241 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 TMEM14BQ9NUH8 114 aa11.3□□□□□ -0.6
RAB40B-202ENST00000538809 TRBV7-1A0A0A6YYK4 115 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 IGHV3-21A0A0B4J1V1 117 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 IGHV3-35A0A0C4DH35 117 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 TMEM213A2RRL7 107 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 C15orf61A6NNL5 157 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 ZNF785A8K8V0 405 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 C3orf84H3BNL1 204 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 CTDSPLO15194 276 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 SERPINE2P07093 398 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 CD7P09564 240 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 S100GP29377 79 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 MFAP2P55001 183 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 TAS2R19P59542 299 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 MRPS10P82664 201 aaKnown RBP11.29□□□□□ -0.6
RAB40B-202ENST00000538809 HAGHQ16775 308 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 GPHB5Q86YW7 130 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 ZNF502Q8TBZ5 544 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 ISOC1Q96CN7 298 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 WDR89Q96FK6 387 aaPredicted RBP11.29□□□□□ -0.6
RAB40B-202ENST00000538809 NEURL2Q9BR09 285 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 OR51B2Q9Y5P1 312 aa11.29□□□□□ -0.6
RAB40B-202ENST00000538809 A8MWP6 167 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 SNAPC5O75971 98 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 IFNA6P05013 189 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 CLEC3BP05452 202 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 P0C879 139 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 PI3P19957 117 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 FAM106AQ4KMX7 169 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 SLC25A24Q6NUK1 477 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 STEAP1BQ6NZ63 245 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 UNQ9165/PRO28630Q6UXU0 137 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 OR5B3Q8NH48 314 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 TERB2Q8NHR7 220 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
RAB40B-202ENST00000538809 TSC22D3Q99576 134 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms