RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	RGP1	Q92546	391 aa	Predicted RBP	13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	LINC01587	Q99440	93 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	C12orf57	Q99622	126 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SCN2A	Q99250	2005 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532		A0A0G2JNJ9	132 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PGLYRP4	Q96LB8	373 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532		Q9UFV3	132 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PSME4	Q14997	1843 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	ESPL1	Q14674	2120 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SIGLEC5	O15389	551 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SLC25A16	P16260	332 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	NSUN5P1	Q3KNT7	163 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SIGIRR	Q6IA17	410 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	IGKV3OR2-268	A0A0C4DH90	116 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PTBP3	O95758	552 aa	Known RBP	13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PIKFYVE	Q9Y2I7	2098 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	ARID2	Q68CP9	1835 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PATJ	Q8NI35	1801 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	FAM3B	P58499	235 aa	Predicted RBP	13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	RNF151	Q2KHN1	245 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	STH	Q8IWL8	128 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	RPRM	Q9NS64	109 aa		13.19	□□□□□ -0.3
NCAPD3-213	ENST00000534532	BMPER	Q8N8U9	685 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SNRNP200	O75643	2136 aa	Known RBP	13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	NBEAP1	P0C6P0	100 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PRSS8	Q16651	343 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MBNL2	Q5VZF2	373 aa	Known RBP	13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	GGN	Q86UU5	652 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TEX45	Q8NA69	505 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PLPPR1	Q8TBJ4	325 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	ERVH48-1	M5A8F1	160 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	HLA-DQA1	P01909	254 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	IL6R	P08887	468 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532		Q0VFX4	171 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	GTSCR1	Q86UQ5	136 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	HIST1H2BA	Q96A08	127 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SAA2-SAA4	A0A096LPE2	208 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MBD3L3	A6NE82	208 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SAA2	P0DJI9	122 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	ASIP	P42127	132 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SP5	Q6BEB4	398 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	BET1L	Q9NYM9	111 aa		13.18	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TNFRSF18	Q9Y5U5	241 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	GPR179	Q6PRD1	2367 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	C1QL1	O75973	258 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	UCP1	P25874	307 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	GCHFR	P30047	84 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	LDLRAD2	Q5SZI1	272 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TMEM101	Q96IK0	257 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TRGV2	A0A075B6R0	118 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	CBY3	A6NI87	242 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532		J3QKU1	62 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	DOCK6	Q96HP0	2047 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SPTBN1	Q01082	2364 aa	Known RBP	13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SAA1	P0DJI8	122 aa	Predicted RBP	13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	GEMIN7	Q9H840	131 aa	Known RBP	13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	ALPK2	Q86TB3	2170 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	RRH	O14718	337 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	EMP1	P54849	157 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	C11orf44	Q8N8P7	122 aa		13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PSMG3	Q9BT73	122 aa	Predicted RBP	13.17	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SLC25A15	Q9Y619	301 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	LINC00271	P0C7V0	271 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SGK494	Q96LW2	274 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TIMM23	O14925	209 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	VPS25	Q9BRG1	176 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SCN5A	Q14524	2016 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	RALGAPA2	Q2PPJ7	1873 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	OTOF	Q9HC10	1997 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	IFITM10	A6NMD0	228 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	UPK2	O00526	184 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PRB3	Q04118	309 aa	Predicted RBP	13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	SRSF6	Q13247	344 aa	Known RBP	13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	DMRTA2	Q96SC8	542 aa		13.16	□□□□□ -0.3
NCAPD3-213	ENST00000534532	OR4C46	A6NHA9	309 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	RHOG	P84095	191 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	CIRBP	Q14011	172 aa	Known RBP	13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MORN2	Q502X0	79 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	COPS9	Q8WXC6	57 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MDC1	Q14676	2089 aa	Known RBP	13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	IGHG3	P01860	377 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	GTF3A	Q92664	365 aa	Known RBP	13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	DUSP14	O95147	198 aa	Known RBP	13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	HLA-DRB1	P01911	266 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	CD24	P25063	80 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	CMC4	P56277	68 aa	Predicted RBP	13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TMEM167A	Q8TBQ9	72 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TRBV6-7	A0A0A0MS04	114 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	OR9G9	P0C7N8	305 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	PAX1	P15863	534 aa		13.15	□□□□□ -0.3
NCAPD3-213	ENST00000534532	IGHV3OR16-8	A0A075B7F1	116 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	CXCL2	P19875	107 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	OR4C5	Q8NGB2	326 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	ABCA4	P78363	2273 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	CCL1	P22362	96 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	GPX4	P36969	197 aa	Predicted RBP	13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 665 ms