RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 FOXC2Q99958 501 aa6.44□□□□□ -1.38
CTNND1-233ENST00000532787 RTBDNQ9BSG5 229 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-233ENST00000532787 LAMTOR2Q9Y2Q5 125 aa6.44□□□□□ -1.38
CTNND1-233ENST00000532787 ZNF646O15015 1829 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-233ENST00000532787 H3BUT2 72 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 APOBEC3AP31941 199 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-233ENST00000532787 ATP5L2Q7Z4Y8 100 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 LHFPL4Q7Z7J7 247 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 FER1L6-AS1Q8NA97 138 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 DNASE2BQ8WZ79 361 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 CYSLTR1Q9Y271 337 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 TRAV8-6A0A0B4J262 113 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 CGB1A6NKQ9 187 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 IGFBP3P17936 291 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-233ENST00000532787 LEPP41159 167 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 ACSF3Q4G176 576 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-233ENST00000532787 TMEM144Q7Z5S9 345 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 MRPL52Q86TS9 123 aaKnown RBP6.43□□□□□ -1.38
CTNND1-233ENST00000532787 ZNF831Q5JPB2 1677 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 ASCC3Q8N3C0 2202 aaKnown RBP6.43□□□□□ -1.38
CTNND1-233ENST00000532787 STARD6P59095 220 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 Q5BKY6 102 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 FAM166AQ6J272 317 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 FAM57AQ8TBR7 257 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 SAP25Q8TEE9 199 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 SSBP3Q9BWW4 388 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-233ENST00000532787 GNB1LQ9BYB4 327 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 NXT2Q9NPJ8 142 aaKnown RBP6.43□□□□□ -1.38
CTNND1-233ENST00000532787 SMPXQ9UHP9 88 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 RNF222A6NCQ9 220 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 PGPEP1LA6NFU8 196 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 TMEM50AO95807 157 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 CNTFRP26992 372 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 EGR4Q05215 589 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 EAF1Q96JC9 268 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-233ENST00000532787 NCOR1P1Q9H4R4 102 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 SEMA5BQ9P283 1151 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 DPM3Q9P2X0 92 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 COL24A1Q17RW2 1714 aa6.43□□□□□ -1.38
CTNND1-233ENST00000532787 TRAV24A0A0B4J272 114 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 KBTBD11-OT1A0A1B0GTJ5 212 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 A0A1B0GW64 132 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 CGAP01215 116 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 LINC00114Q6XXX2 140 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 SSBP4Q9BWG4 385 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-233ENST00000532787 MS4A6AQ9H2W1 248 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 LINC00312Q9Y6C7 94 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 SCO2A0A1W2PP80 73 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 A0A1W2PRE2 83 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 C12orf77C9JDV5 145 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 GREM1O60565 184 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 C1QCP02747 245 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 SEC11AP67812 179 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 PNKDQ8N490 385 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 RSPO3Q9BXY4 272 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-233ENST00000532787 KLK15Q9H2R5 256 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 TRAV9-2A0A087WT02 112 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 FTH1P19P0C7X4 201 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 RPL23P62829 140 aaKnown RBP6.42□□□□□ -1.38
CTNND1-233ENST00000532787 C21orf62Q9NYP8 219 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 IQCF6A8MYZ5 107 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 UBE2CO00762 179 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 FGF16O43320 207 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 FAM74A4Q5TZK3 123 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 RASL11AQ6T310 242 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 TNFRSF14Q92956 283 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 WFDC6Q9BQY6 131 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 WNT10AQ9GZT5 417 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 PILRBQ9UKJ0 227 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 ZNF257Q9Y2Q1 563 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 SHANK3Q9BYB0 1731 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 IGFBP2P18065 325 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 ORMDL2Q53FV1 153 aa6.42□□□□□ -1.38
CTNND1-233ENST00000532787 ZFC3H1O60293 1989 aaKnown RBP6.42□□□□□ -1.38
CTNND1-233ENST00000532787 YPEL1O60688 119 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 MOSP00540 346 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 CD69Q07108 199 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 STPG1Q5TH74 334 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 YPEL2Q96QA6 119 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 Q9H3A6 140 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 TMEM106BQ9NUM4 274 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 TPRP12270 2363 aaKnown RBP6.41□□□□□ -1.38
CTNND1-233ENST00000532787 IGKV3D-15A0A087WSY6 115 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 TRBV6-7A0A0A0MS04 114 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 TRAV14DV4A0A0A6YYC5 116 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 SPAARA0A1B0GVQ0 90 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 C4orf51C9J302 202 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 IGKV3-15P01624 115 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 HBDP02042 147 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 TRGV3P03979 118 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 REG1AP05451 166 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 CELA2AP08217 269 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 CCL1P22362 96 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 TFF3Q07654 80 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 SRSF1Q07955 248 aaKnown RBP eCLIP6.41□□□□□ -1.381e-7■□□□□ 10.7
CTNND1-233ENST00000532787 NRN1Q9NPD7 142 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 SCN9AQ15858 1988 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 XIRP1Q702N8 1843 aaKnown RBP6.41□□□□□ -1.38
CTNND1-233ENST00000532787 FABP5P3A8MUU1 101 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 DPM2O94777 84 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms