RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 OR10G8Q8NGN5 311 aa12.48□□□□□ -0.41
USP47-207ENST00000527733 GATAD1Q8WUU5 269 aa12.48□□□□□ -0.41
USP47-207ENST00000527733 SH3BGRL3Q9H299 93 aa12.48□□□□□ -0.41
USP47-207ENST00000527733 PLCE1Q9P212 2302 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 IGLV3-9A0A075B6K5 115 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 IGHV2-26A0A0B4J1V2 119 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 IGLV3-1P01715 115 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 ARPC1AQ92747 370 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 IFT22Q9H7X7 185 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 TRAV14DV4A0A0A6YYC5 116 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 SH2D7A6NKC9 451 aaPredicted RBP12.47□□□□□ -0.41
USP47-207ENST00000527733 DANCRP0C864 163 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 ID3Q02535 119 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 PPP1R27Q86WC6 154 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 ZNF439Q8NDP4 499 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 OR51G1Q8NGK1 321 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 EEF1AKMT3Q96AZ1 226 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 NABP2Q9BQ15 211 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 C15orf61A6NNL5 157 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 SNRPCP09234 159 aaKnown RBP12.47□□□□□ -0.41
USP47-207ENST00000527733 HIST1H1EP10412 219 aaKnown RBP12.47□□□□□ -0.41
USP47-207ENST00000527733 MEF2BQ02080 365 aaPredicted RBP12.47□□□□□ -0.41
USP47-207ENST00000527733 TMEM155Q4W5P6 130 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 RNF222A6NCQ9 220 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 B4DEV8 164 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 TIMM23O14925 209 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 FAM106AQ4KMX7 169 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 CENPVQ7Z7K6 275 aaPredicted RBP12.47□□□□□ -0.41
USP47-207ENST00000527733 LDLRAD3Q86YD5 345 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 TMEM208Q9BTX3 173 aa12.47□□□□□ -0.41
USP47-207ENST00000527733 ELOA3CA0A087WX78 387 aaPredicted RBP12.46□□□□□ -0.41
USP47-207ENST00000527733 F12P00748 615 aaPredicted RBP12.46□□□□□ -0.41
USP47-207ENST00000527733 SMIM17P0DL12 118 aa12.46□□□□□ -0.41
USP47-207ENST00000527733 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.41
USP47-207ENST00000527733 SUPT4H1P63272 117 aaKnown RBP12.46□□□□□ -0.41
USP47-207ENST00000527733 OR2J3O76001 311 aa12.46□□□□□ -0.41
USP47-207ENST00000527733 LMO1P25800 156 aa12.46□□□□□ -0.41
USP47-207ENST00000527733 MAS1LP35410 378 aa12.46□□□□□ -0.41
USP47-207ENST00000527733 FAM24BQ8N5W8 94 aa12.46□□□□□ -0.41
USP47-207ENST00000527733 C2CD4CQ8TF44 421 aa12.46□□□□□ -0.41
USP47-207ENST00000527733 CACNG8Q8WXS5 425 aa12.46□□□□□ -0.41
USP47-207ENST00000527733 CLEC5AQ9NY25 188 aa12.46□□□□□ -0.41
USP47-207ENST00000527733 H3BQ15 152 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 CGAP01215 116 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 FAM162BQ5T6X4 162 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 LYPD2Q6UXB3 125 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 C5orf24Q7Z6I8 188 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 STPG3Q8N7X2 389 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 TEX45Q8NA69 505 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 Q8TCH9 128 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 TXN2Q99757 166 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 RNF126Q9BV68 326 aa12.46□□□□□ -0.42
USP47-207ENST00000527733 A6NNC1 897 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 IFITM2Q01629 132 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 SP5Q6BEB4 398 aaPredicted RBP12.45□□□□□ -0.42
USP47-207ENST00000527733 TRGV3P03979 118 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 COL8A1P27658 744 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 ID1P41134 155 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 WFDC3Q8IUB2 231 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 SRSF12Q8WXF0 261 aaKnown RBP12.45□□□□□ -0.42
USP47-207ENST00000527733 MALRD1Q5VYJ5 2156 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 SCGB1D1O95968 90 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 CD24P25063 80 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 TPPP2P59282 170 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 EFNB3Q15768 340 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 RNASEH2CQ8TDP1 164 aaKnown RBP12.45□□□□□ -0.42
USP47-207ENST00000527733 RPRMQ9NS64 109 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 C7orf77A4D0Y5 90 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 FAM90A9PA6NNJ1 464 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 B4DSR2 109 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 LRRC75BQ2VPJ9 315 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 CYB561D1Q8N8Q1 229 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 ANAPC16Q96DE5 110 aa12.45□□□□□ -0.42
USP47-207ENST00000527733 MBNL3Q9NUK0 354 aaKnown RBP12.45□□□□□ -0.42
USP47-207ENST00000527733 CEP192Q8TEP8 1941 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 TRAV40A0A0B4J280 105 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 SPINK4O60575 86 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 RPEL1Q2QD12 228 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 WDR86Q86TI4 376 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 NPCDR1Q9BY65 106 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 YAE1D1Q9NRH1 226 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 NAGKQ9UJ70 344 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 RPL7P18124 248 aaKnown RBP12.44□□□□□ -0.42
USP47-207ENST00000527733 RELQ04864 619 aaPredicted RBP12.44□□□□□ -0.42
USP47-207ENST00000527733 AARDQ4LEZ3 155 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 FAM210BQ96KR6 192 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 BPESC1Q9GZL8 116 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 NAT8BQ9UHF3 227 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 FBXL7Q9UJT9 491 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 M0R1W7 72 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 HSPB1P04792 205 aaKnown RBP12.44□□□□□ -0.42
USP47-207ENST00000527733 CFHR2P36980 270 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 RAB9AP51151 201 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 FREM1Q5H8C1 2179 aa12.44□□□□□ -0.42
USP47-207ENST00000527733 H0YIZ8 118 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 M0QZK8 103 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 P01737 135 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 ERVK11-1P61568 191 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 CYP2G1PQ6ZSU1 146 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 MRPL32Q9BYC8 188 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms