RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 MYL12AP19105 171 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 USF1P22415 310 aaPredicted RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 DCKP27707 260 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 MAS1LP35410 378 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 GPX4P36969 197 aaPredicted RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 DDOSTP39656 456 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 VHLP40337 213 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 IFITM2Q01629 132 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 CDK5R1Q15078 307 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 ZNF181Q2M3W8 571 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 TMEM155Q4W5P6 130 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 LRRC10Q5BKY1 277 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 FAM201AQ5SY85 155 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 CASC10Q5T4H9 136 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 PRAMEF5Q5TYX0 476 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 OR2G6Q5TZ20 316 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 TMEM42Q69YG0 159 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 XAF1Q6GPH4 301 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 Q6ZSR3 168 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 ZNF826PQ6ZT77 177 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 TMEM61Q8N0U2 210 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 ZNF561Q8N587 486 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 BPIFB6Q8NFQ5 453 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 OR1M1Q8NGA1 313 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 OR51G1Q8NGK1 321 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 OR13C9Q8NGT0 318 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 OR2G2Q8NGZ5 317 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 OR10AC1Q8NH08 325 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 OR8S1Q8NH09 359 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 OR5P3Q8WZ94 311 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 RGP1Q92546 391 aaPredicted RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 CCL17Q92583 94 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 PACRGQ96M98 296 aaPredicted RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 C2orf88Q9BSF0 95 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 RTL8AQ9BWD3 113 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 CHST5Q9GZS9 411 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 TLNRD1Q9H1K6 362 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 METTL17Q9H7H0 456 aaPredicted RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 ABCB9Q9NP78 766 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 IFT46Q9NQC8 304 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 PIGLQ9Y2B2 252 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 POLDIP2Q9Y2S7 368 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 RBMX2Q9Y388 322 aaKnown RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 NOP16Q9Y3C1 178 aaKnown RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 MPC1Q9Y5U8 109 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 NPTNQ9Y639 398 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 CELSR2Q9HCU4 2923 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 APCP25054 2843 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 DCHS2Q6V1P9 2916 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 CSMD1Q96PZ7 3565 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 PPIAL4EA0A075B759 164 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 IGHV3OR15-7A0A075B7D8 119 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 IGKV1-9A0A0C4DH69 117 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 FAM240BA0A1B0GVZ2 78 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 A0A1B0GW55 424 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 A6NIN4 97 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 OR5B21A6NL26 309 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 TMEM212A6NML5 194 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 CEACAM18A8MTB9 384 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 CDIPTO14735 213 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 MYL12BO14950 172 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 SYNGR1O43759 233 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 FSTL3O95633 263 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 NRASP01111 189 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 IGHG4P01861 327 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 TFF1P04155 84 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 IFNA4P05014 189 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 ISG15P05161 165 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 CDK1P06493 297 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 OCM2P0CE71 109 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 OCMP0CE72 109 aaPredicted RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 DUX4L2P0CJ85 424 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 DUX4L3P0CJ86 424 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 DUX4L5P0CJ88 424 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 DUX4L6P0CJ89 424 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 DUX4L7P0CJ90 424 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 PPIAL4FP0DN26 164 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 CRHBPP24387 322 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 RCVRNP35243 200 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 TMEM33P57088 247 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 HERVK_113P61574 105 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 RAB11AP62491 216 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 GNG3P63215 75 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 SLC35A2P78381 396 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 DEFA6Q01524 100 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 ST3GAL4Q11206 333 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 OR5I1Q13606 314 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 RAB11BQ15907 218 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 PSG3Q16557 428 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 GUK1Q16774 197 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 CEACAM21Q3KPI0 293 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 ZNF404Q494X3 552 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 TMEM244Q5VVB8 128 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 TEX36Q5VZQ5 186 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 RPL22L1Q6P5R6 122 aaKnown RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 HAGHLQ6PII5 290 aaPredicted RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 DUX4L9Q6RFH8 374 aaPredicted RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 WDR82Q6UXN9 313 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 ACP7Q6ZNF0 438 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms