RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CCDC140Q96MF4 163 aa13.91□□□□□ -0.18
CLDND1-220ENST00000508902 AIFM2Q9BRQ8 373 aa13.91□□□□□ -0.18
CLDND1-220ENST00000508902 QTRT1Q9BXR0 403 aaKnown RBP13.91□□□□□ -0.18
CLDND1-220ENST00000508902 NDUFA4L2Q9NRX3 87 aa13.91□□□□□ -0.18
CLDND1-220ENST00000508902 TMEM14BQ9NUH8 114 aa13.91□□□□□ -0.18
CLDND1-220ENST00000508902 GPR132Q9UNW8 380 aa13.91□□□□□ -0.18
CLDND1-220ENST00000508902 MFSD2BA6NFX1 497 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 FAM223BA6NKX1 122 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 C15orf61A6NNL5 157 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 IGHV3-23P01764 117 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 ERVK-16P61578 105 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 C15orf32Q32M92 178 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 C9orf66Q5T8R8 295 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 ACSM6Q6P461 480 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 FAM223AQ8IWN6 122 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 SDHCQ99643 169 aaPredicted RBP13.9□□□□□ -0.18
CLDND1-220ENST00000508902 THAP7Q9BT49 309 aaPredicted RBP13.9□□□□□ -0.18
CLDND1-220ENST00000508902 SRRQ9GZT4 340 aa13.9□□□□□ -0.18
CLDND1-220ENST00000508902 PEF1Q9UBV8 284 aaKnown RBP13.9□□□□□ -0.18
CLDND1-220ENST00000508902 HUWE1Q7Z6Z7 4374 aaKnown RBP13.89□□□□□ -0.19
CLDND1-220ENST00000508902 C3orf85A0A1B0GTC6 90 aa13.89□□□□□ -0.19
CLDND1-220ENST00000508902 UCP1P25874 307 aa13.89□□□□□ -0.19
CLDND1-220ENST00000508902 ETV6P41212 452 aa13.89□□□□□ -0.19
CLDND1-220ENST00000508902 KLF5Q13887 457 aaPredicted RBP13.89□□□□□ -0.19
CLDND1-220ENST00000508902 NECAP1Q8NC96 275 aa13.89□□□□□ -0.19
CLDND1-220ENST00000508902 MRAPQ8TCY5 172 aa13.89□□□□□ -0.19
CLDND1-220ENST00000508902 COMMD5Q9GZQ3 224 aa13.89□□□□□ -0.19
CLDND1-220ENST00000508902 RANGRFQ9HD47 186 aaPredicted RBP13.89□□□□□ -0.19
CLDND1-220ENST00000508902 FBXL7Q9UJT9 491 aa13.89□□□□□ -0.19
CLDND1-220ENST00000508902 OR51B2Q9Y5P1 312 aa13.89□□□□□ -0.19
CLDND1-220ENST00000508902 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.88□□□□□ -0.19
CLDND1-220ENST00000508902 DISC1C4P0D8 188 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 PPP5D1E7EU14 171 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 OR5AC1P0C628 307 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 EDN2P20800 178 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 PYDC2Q56P42 97 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 REC114Q7Z4M0 266 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 SLC25A42Q86VD7 318 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 OR1L8Q8NGR8 309 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 ZFAND1Q8TCF1 268 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 PRR25Q96S07 402 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 GPR61Q9BZJ8 451 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 PRR13Q9NZ81 148 aa13.88□□□□□ -0.19
CLDND1-220ENST00000508902 A0A0B4J293 547 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 HLA-AP01891 365 aaKnown RBP13.87□□□□□ -0.19
CLDND1-220ENST00000508902 TRAPPC2P0DI81 140 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 TRAPPC2BP0DI82 140 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 SYNJ2BPP57105 145 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 ATP5G2Q06055 141 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 SURF2Q15527 256 aaPredicted RBP13.87□□□□□ -0.19
CLDND1-220ENST00000508902 ADAMTSL5Q6ZMM2 481 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 Q6ZRM9 215 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 Q8N402 240 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 GDPD1Q8N9F7 314 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 GLYATL2Q8WU03 294 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 ZNF414Q96IQ9 312 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 SRSF8Q9BRL6 282 aaKnown RBP13.87□□□□□ -0.19
CLDND1-220ENST00000508902 NAA60Q9H7X0 242 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 COPZ2Q9P299 210 aa13.87□□□□□ -0.19
CLDND1-220ENST00000508902 CRYM-AS1A6NIL9 109 aa13.86□□□□□ -0.19
CLDND1-220ENST00000508902 SERPINE2P07093 398 aa13.86□□□□□ -0.19
CLDND1-220ENST00000508902 OR13C7P0DN81 318 aa13.86□□□□□ -0.19
CLDND1-220ENST00000508902 S100GP29377 79 aa13.86□□□□□ -0.19
CLDND1-220ENST00000508902 SUPT4H1P63272 117 aaKnown RBP13.86□□□□□ -0.19
CLDND1-220ENST00000508902 BAK1Q16611 211 aa13.86□□□□□ -0.19
CLDND1-220ENST00000508902 PRRT1Q99946 306 aa13.86□□□□□ -0.19
CLDND1-220ENST00000508902 PRNDQ9UKY0 176 aa13.86□□□□□ -0.19
CLDND1-220ENST00000508902 SAP30O75446 220 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 ZP3P21754 424 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 S100A5P33763 92 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 ECI1P42126 302 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 SPINK9Q5DT21 86 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 CCDC71LQ8N9Z2 235 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 OR5B3Q8NH48 314 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 LSM10Q969L4 123 aaKnown RBP13.85□□□□□ -0.19
CLDND1-220ENST00000508902 HINT2Q9BX68 163 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 TMEM222Q9H0R3 208 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 MCUBQ9NWR8 336 aa13.85□□□□□ -0.19
CLDND1-220ENST00000508902 F8W735 103 aaPredicted RBP13.84□□□□□ -0.19
CLDND1-220ENST00000508902 SNAPC5O75971 98 aa13.84□□□□□ -0.19
CLDND1-220ENST00000508902 CDS2O95674 445 aa13.84□□□□□ -0.19
CLDND1-220ENST00000508902 THOC7Q6I9Y2 204 aaKnown RBP13.84□□□□□ -0.19
CLDND1-220ENST00000508902 H2BFWTQ7Z2G1 175 aa13.84□□□□□ -0.19
CLDND1-220ENST00000508902 SELENOHQ8IZQ5 122 aaKnown RBP13.84□□□□□ -0.19
CLDND1-220ENST00000508902 C14orf166Q9Y224 244 aaKnown RBP13.84□□□□□ -0.19
CLDND1-220ENST00000508902 F11RQ9Y624 299 aaKnown RBP13.84□□□□□ -0.19
CLDND1-220ENST00000508902 TEX13DA0A0J9YY54 714 aaPredicted RBP13.83□□□□□ -0.2
CLDND1-220ENST00000508902 K7EIM0 57 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 CSN3P07498 182 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 PRCDQ00LT1 54 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 TMEM187Q14656 261 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 TRIM16LQ309B1 348 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 C11orf87Q6NUJ2 197 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 CLEC19AQ6UXS0 136 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 ZNF429Q86V71 674 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 OR9G4Q8NGQ1 327 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 ZNF502Q8TBZ5 544 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 TSC22D3Q99576 134 aa13.83□□□□□ -0.2
CLDND1-220ENST00000508902 LSM4Q9Y4Z0 139 aaKnown RBP13.83□□□□□ -0.2
CLDND1-220ENST00000508902 IGHV3-21A0A0B4J1V1 117 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms