RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 DMRTC2Q8IXT2 367 aaPredicted RBP9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 ST6GALNAC3Q8NDV1 305 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 C14orf144Q96I85 54 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 FASNP49327 2511 aaKnown RBP9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 A0A087X0M5 115 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 A0A1B0GX30 115 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 C17orf100A8MU93 164 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 SHISA9B4DS77 424 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 MT-CO2P00403 227 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 RAB7AP51149 207 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 TLE1Q04724 770 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 RAB31Q13636 194 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 HNF4GQ14541 408 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 MORN2Q502X0 79 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 PRAMEF5Q5TYX0 476 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 STUMQ69YW2 141 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 ZNF600Q6ZNG1 722 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 LINC01551Q86U37 167 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 NECAP1Q8NC96 275 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 FAM222BQ8WU58 562 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 CORO2AQ92828 525 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 QTRT1Q9BXR0 403 aaKnown RBP9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 HEYLQ9NQ87 328 aaPredicted RBP9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 USF3Q68DE3 2245 aa9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 RAI1Q7Z5J4 1906 aaPredicted RBP9.06□□□□□ -0.96
SH3RF1-203ENST00000508685 ST8SIA5O15466 376 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 IGHV3-7P01780 117 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 STAG3L2P0CL84 134 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 STAG3L3P0CL85 134 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 GZMBP10144 247 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 CNN1P51911 297 aaKnown RBP9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 FAM216BQ8N7L0 139 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 Q8N7P7 452 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 BEND2Q8NDZ0 799 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 LINC01560Q8TB33 94 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 GATAD1Q8WUU5 269 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 S1PR3Q99500 378 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 NPVFQ9HCQ7 196 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 GNG12Q9UBI6 72 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 DYSFO75923 2080 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 ASH1LQ9NR48 2969 aaKnown RBP9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 E7EQL1 145 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 FNDC10F2Z333 226 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 F2RL2O00254 374 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 FCGR3BO75015 233 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 OR9G9P0C7N8 305 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 RD3LP0DJH9 198 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 ATP5IP56385 69 aaPredicted RBP9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 LINC00205P59089 165 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 GNB1P62873 340 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 SSX2Q16385 188 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 UTF1Q5T230 341 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 CST9LP1Q5W188 147 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 CDPF1Q6NVV7 123 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 SSX9Q7RTT3 188 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 SSX8Q7RTT4 187 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 TMEM144Q7Z5S9 345 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 Q8TCH9 128 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 CCL13Q99616 98 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 SAP30LQ9HAJ7 183 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 NGBQ9NPG2 151 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 LY96Q9Y6Y9 160 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 ARL2-SNX15V9GYD0 113 aa9.05□□□□□ -0.96
SH3RF1-203ENST00000508685 MDFIC2A0A1B0GVS7 189 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 PLAUP00749 431 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 CHRNB4P30926 498 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 ADORA2A-AS1P86434 159 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 IQCJQ1A5X6 159 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 TREML4Q6UXN2 200 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 TMEM37Q8WXS4 190 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 ADTRPQ96IZ2 230 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 GAFA1Q96PS6 74 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 FUT9Q9Y231 359 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 HELZ2Q9BYK8 2649 aaKnown RBP9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 NDUFB4O95168 129 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 IRF2P14316 349 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 TNFRSF1AP19438 455 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 NPPCP23582 126 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 RPL19P84098 196 aaKnown RBP9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 FAM78BQ5VT40 261 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 OR4S2Q8NH73 311 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 SDSLQ96GA7 329 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 ELOVL1Q9BW60 279 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 TRAPPC1Q9Y5R8 145 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 PXMP4Q9Y6I8 212 aa9.04□□□□□ -0.96
SH3RF1-203ENST00000508685 ABCA4P78363 2273 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 SVEP1Q4LDE5 3571 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 A0A0U1RQK1 487 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 ZNF320A2RRD8 509 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 PRSS46E5RG02 174 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 M0R1X1 148 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 SIAH2O43255 324 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 IL3RAP26951 378 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 LOXL3P58215 753 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 YPEL3P61236 119 aaPredicted RBP9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 RPL15P61313 204 aaKnown RBP9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 RHOBP62745 196 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms