RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 S100A7P31151 101 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 RUNX1Q01196 453 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 RPL18Q07020 188 aaKnown RBP0.29□□□□□ -2.36
GYPB-209ENST00000508618 SAPCD1Q5SSQ6 148 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 IBA57Q5T440 356 aaKnown RBP0.29□□□□□ -2.36
GYPB-209ENST00000508618 C1orf194Q5T5A4 169 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 SYPL2Q5VXT5 272 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 GLT8D1Q68CQ7 371 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 ZNF826PQ6ZT77 177 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 TMEM161BQ8NDZ6 487 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 OR4D11Q8NGI4 311 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 AQP3Q92482 292 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 OR8D2Q9GZM6 311 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 FUT9Q9Y231 359 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 KIF24Q5T7B8 1368 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 KMT2DO14686 5537 aa0.29□□□□□ -2.36
GYPB-209ENST00000508618 GREB1Q4ZG55 1949 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 GGT3PA6NGU5 568 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 FABP5P3A8MUU1 101 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 C19orf84I3L1E1 186 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 I3L521 148 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 NDUFS6O75380 124 aaKnown RBP0.28□□□□□ -2.36
GYPB-209ENST00000508618 OR5F1O95221 314 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 APOEP02649 317 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 CLPSP04118 112 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 UGT2B7P16662 529 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 CCL1P22362 96 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 HLA-DMBP28068 263 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 CCL20P78556 96 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 IFITM2Q01629 132 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 CST9Q5W186 159 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 HIST2H3AQ71DI3 136 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 AAED1Q7RTV5 226 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 ZNF550Q7Z398 422 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 FUNDC1Q8IVP5 155 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 FAM9CQ8IZT9 166 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 DEFB125Q8N687 156 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 TMEM251Q8N6I4 163 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 RASSF5Q8WWW0 418 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 CMTM5Q96DZ9 223 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 MIXL1Q9H2W2 232 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 PXMP4Q9Y6I8 212 aa0.28□□□□□ -2.36
GYPB-209ENST00000508618 ALPK2Q86TB3 2170 aa0.28□□□□□ -2.37
GYPB-209ENST00000508618 ADGRB2O60241 1585 aa0.28□□□□□ -2.37
GYPB-209ENST00000508618 COL4A5P29400 1685 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 TRBV6-7A0A0A0MS04 114 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 C1orf232A0A0U1RR37 186 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 FABP12A6NFH5 140 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 TMEM212A6NML5 194 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 COCHO43405 550 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 CALUO43852 315 aaPredicted RBP0.27□□□□□ -2.37
GYPB-209ENST00000508618 UBBP0CG47 229 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 MARCKSL1P49006 195 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 UBE2IP63279 158 aaKnown RBP0.27□□□□□ -2.37
GYPB-209ENST00000508618 TMED1Q13445 227 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 ZNF846Q147U1 533 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 SPANXN5Q5MJ07 72 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 KRTAP19-3Q7Z4W3 81 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 PHF13Q86YI8 300 aaPredicted RBP0.27□□□□□ -2.37
GYPB-209ENST00000508618 LINC00471Q8N535 108 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 ERMAPQ96PL5 475 aaPredicted RBP0.27□□□□□ -2.37
GYPB-209ENST00000508618 C7orf50Q9BRJ6 194 aaKnown RBP0.27□□□□□ -2.37
GYPB-209ENST00000508618 FAM96AQ9H5X1 160 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 EFCAB1Q9HAE3 211 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 CXorf21Q9HAI6 301 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 IMP3Q9NV31 184 aaKnown RBP0.27□□□□□ -2.37
GYPB-209ENST00000508618 PLEKHJ1Q9NW61 149 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 PAQR5Q9NXK6 330 aaPredicted RBP0.27□□□□□ -2.37
GYPB-209ENST00000508618 IL36BQ9NZH7 164 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 CKLFQ9UBR5 152 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 RIC1Q4ADV7 1423 aa0.27□□□□□ -2.37
GYPB-209ENST00000508618 GOLGA8KD6RF30 607 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 M0R2N4 97 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 PFDN6O15212 129 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 HYPMO75409 117 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 PRM2P04554 102 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 FAM228BP0C875 321 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 COX6A1P12074 109 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 RPS4Y1P22090 263 aaKnown RBP0.26□□□□□ -2.37
GYPB-209ENST00000508618 BRS3P32247 399 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 SUPT4H1P63272 117 aaKnown RBP0.26□□□□□ -2.37
GYPB-209ENST00000508618 PPP1R1AQ13522 171 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 PDE6HQ13956 83 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 MCFD2Q8NI22 146 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 PIGXQ8TBF5 258 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 DNAJB3Q8WWF6 145 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 TMEM106AQ96A25 262 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 HDHD2Q9H0R4 259 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 MAP1LC3AQ9H492 121 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 C3orf18Q9UK00 162 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 C15orf41Q9Y2V0 281 aa0.26□□□□□ -2.37
GYPB-209ENST00000508618 TOPBP1Q92547 1522 aa0.25□□□□□ -2.37
GYPB-209ENST00000508618 C9orf84Q5VXU9 1444 aa0.25□□□□□ -2.37
GYPB-209ENST00000508618 PIK3R4Q99570 1358 aa0.25□□□□□ -2.37
GYPB-209ENST00000508618 TTC21AQ8NDW8 1320 aa0.25□□□□□ -2.37
GYPB-209ENST00000508618 A0A0A6YYH2 397 aa0.25□□□□□ -2.37
GYPB-209ENST00000508618 A6NJ64 397 aa0.25□□□□□ -2.37
GYPB-209ENST00000508618 HTR1AP08908 422 aa0.25□□□□□ -2.37
GYPB-209ENST00000508618 OCM2P0CE71 109 aa0.25□□□□□ -2.37
GYPB-209ENST00000508618 RPL12P30050 165 aaKnown RBP0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms