RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 SSX5O60225 188 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 SCGNO76038 276 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 HRASP01112 189 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 CLEC3BP05452 202 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 HIST1H1BP16401 226 aaKnown RBP10.08□□□□□ -0.8
ATG4B-222ENST00000491867 HLA-DMBP28068 263 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 ADMP35318 185 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 GNG2P59768 71 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 ZNF124Q15973 351 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 PVRIGQ6DKI7 326 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 ZNF66Q6ZN08 573 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 Q8N1X5 172 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 MFSD4AQ8N468 514 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 GPHA2Q96T91 129 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 RNF126Q9BV68 326 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 HRH4Q9H3N8 390 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 UFC1Q9Y3C8 167 aa10.08□□□□□ -0.8
ATG4B-222ENST00000491867 TRBV7-1A0A0A6YYK4 115 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 TRAV10A0A0B4J240 114 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 MFSD2BA6NFX1 497 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 OR4C46A6NHA9 309 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 CGB1A6NKQ9 187 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 NOTOA8MTQ0 251 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 REG1AP05451 166 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 P0DMU3 169 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 FAM231AP0DMU4 169 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 FAM231CP0DMU5 169 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 DEFA4P12838 97 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 MYOD1P15172 320 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 HLA-GP17693 338 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 ELLP55199 621 aaPredicted RBP10.07□□□□□ -0.8
ATG4B-222ENST00000491867 LAMTOR1Q6IAA8 161 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 Q6ZTC4 211 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 SSX9Q7RTT3 188 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 CXorf58Q96LI9 332 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 CNBD2Q96M20 576 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 BET1LQ9NYM9 111 aa10.07□□□□□ -0.8
ATG4B-222ENST00000491867 DNAH5Q8TE73 4624 aa10.06□□□□□ -0.8
ATG4B-222ENST00000491867 FGF9P31371 208 aaPredicted RBP10.06□□□□□ -0.8
ATG4B-222ENST00000491867 MSMO1Q15800 293 aa10.06□□□□□ -0.8
ATG4B-222ENST00000491867 TIMM50Q3ZCQ8 353 aa10.06□□□□□ -0.8
ATG4B-222ENST00000491867 LGALS14Q8TCE9 139 aa10.06□□□□□ -0.8
ATG4B-222ENST00000491867 SCRT2Q9NQ03 307 aa10.06□□□□□ -0.8
ATG4B-222ENST00000491867 DAPK2Q9UIK4 370 aa10.06□□□□□ -0.8
ATG4B-222ENST00000491867 IGLV2-18A0A075B6J9 118 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 RBFOX2O43251 390 aaKnown RBP eCLIP10.05□□□□□ -0.87e-8■■■□□ 15.7
ATG4B-222ENST00000491867 TNFSF12O43508 249 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 CA1P00915 261 aaPredicted RBP10.05□□□□□ -0.8
ATG4B-222ENST00000491867 GPR183P32249 361 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 HSPA13P48723 471 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 OR2B8PP59922 312 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 ARPC4P59998 168 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 SOHLH1Q5JUK2 328 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 IZUMO2Q6UXV1 221 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 Q6ZR54 194 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 SPAG16Q8N0X2 631 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 Q8NAQ8 132 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 ZNF502Q8TBZ5 544 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 SECTM1Q8WVN6 248 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 AIFM2Q9BRQ8 373 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 VCX3BQ9H321 246 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 HRASLSQ9HDD0 168 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 CCL28Q9NRJ3 127 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 TXNL4BQ9NX01 149 aaKnown RBP10.05□□□□□ -0.8
ATG4B-222ENST00000491867 RHBDL2Q9NX52 303 aa10.05□□□□□ -0.8
ATG4B-222ENST00000491867 IGLC7A0M8Q6 106 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 RBMY1A1P0DJD3 496 aaKnown RBP10.04□□□□□ -0.8
ATG4B-222ENST00000491867 RBMY1CP0DJD4 496 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 FCGR2CP31995 323 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 TAS2R31P59538 309 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 GABARAPL2P60520 117 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 TMEM187Q14656 261 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 RBMY1FQ15415 496 aaKnown RBP10.04□□□□□ -0.8
ATG4B-222ENST00000491867 UBE2UQ5VVX9 321 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 SFXN4Q6P4A7 337 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 TPRA1Q86W33 373 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 BEST4Q8NFU0 473 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 OR13F1Q8NGS4 319 aa10.04□□□□□ -0.8
ATG4B-222ENST00000491867 IGHV4-28A0A0C4DH34 117 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 SULT1C2O00338 296 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 PPYP01298 95 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 AMBPP02760 352 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 CTSDP07339 412 aaPredicted RBP10.03□□□□□ -0.8
ATG4B-222ENST00000491867 FGF2P09038 288 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 PTHLHP12272 177 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 RPA2P15927 270 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 PTBP1P26599 531 aaKnown RBP eCLIP10.03□□□□□ -0.8
ATG4B-222ENST00000491867 POU2AF1Q16633 256 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 PLET1Q6UQ28 207 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 CENPSQ8N2Z9 138 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 ZBTB34Q8NCN2 500 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 TMEM190Q8WZ59 177 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 SRSF8Q9BRL6 282 aaKnown RBP10.03□□□□□ -0.8
ATG4B-222ENST00000491867 ZNF436Q9C0F3 470 aaPredicted RBP10.03□□□□□ -0.8
ATG4B-222ENST00000491867 COMMD5Q9GZQ3 224 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 THYN1Q9P016 225 aa10.03□□□□□ -0.8
ATG4B-222ENST00000491867 RRP15Q9Y3B9 282 aaKnown RBP10.03□□□□□ -0.8
ATG4B-222ENST00000491867 FLG2Q5D862 2391 aaPredicted RBP10.03□□□□□ -0.8
ATG4B-222ENST00000491867 TRAV3A0A0B4J244 114 aa10.02□□□□□ -0.81
ATG4B-222ENST00000491867 UPK2O00526 184 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms