RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 OR13C7P0DN81 318 aa15.55■□□□□ 0.08
HDAC4-209ENST00000487617 ARL3P36405 182 aa15.55■□□□□ 0.08
HDAC4-209ENST00000487617 TAS2R19P59542 299 aa15.55■□□□□ 0.08
HDAC4-209ENST00000487617 HSD17B13Q7Z5P4 300 aaPredicted RBP15.55■□□□□ 0.08
HDAC4-209ENST00000487617 LHFPL1Q86WI0 220 aa15.55■□□□□ 0.08
HDAC4-209ENST00000487617 OR4D10Q8NGI6 311 aa15.55■□□□□ 0.08
HDAC4-209ENST00000487617 CXorf58Q96LI9 332 aa15.55■□□□□ 0.08
HDAC4-209ENST00000487617 NDUFA4L2Q9NRX3 87 aa15.55■□□□□ 0.08
HDAC4-209ENST00000487617 PRNDQ9UKY0 176 aa15.55■□□□□ 0.08
HDAC4-209ENST00000487617 TRBV7-1A0A0A6YYK4 115 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 MFSD2BA6NFX1 497 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 CYB5BO43169 146 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 RAB3DO95716 219 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 CD74P04233 296 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 PI3P19957 117 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 MRPS10P82664 201 aaKnown RBP15.54■□□□□ 0.08
HDAC4-209ENST00000487617 WT1-ASQ06250 92 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 GDPD1Q8N9F7 314 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 LSM10Q969L4 123 aaKnown RBP15.54■□□□□ 0.08
HDAC4-209ENST00000487617 ZNF486Q96H40 463 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-209ENST00000487617 DIRAS2Q96HU8 199 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 TSC22D3Q99576 134 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 FKBP11Q9NYL4 201 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 THYN1Q9P016 225 aa15.54■□□□□ 0.08
HDAC4-209ENST00000487617 SERPINE2P07093 398 aa15.53■□□□□ 0.08
HDAC4-209ENST00000487617 PTBP1P26599 531 aaKnown RBP eCLIP15.53■□□□□ 0.08
HDAC4-209ENST00000487617 PPP5CP53041 499 aa15.53■□□□□ 0.08
HDAC4-209ENST00000487617 PIGPP57054 158 aa15.53■□□□□ 0.08
HDAC4-209ENST00000487617 RND3P61587 244 aa15.53■□□□□ 0.08
HDAC4-209ENST00000487617 SCGB2B2Q4G0G5 96 aa15.53■□□□□ 0.08
HDAC4-209ENST00000487617 LCN12Q6JVE5 192 aa15.53■□□□□ 0.08
HDAC4-209ENST00000487617 STEAP1BQ6NZ63 245 aa15.53■□□□□ 0.08
HDAC4-209ENST00000487617 H2BFWTQ7Z2G1 175 aa15.53■□□□□ 0.08
HDAC4-209ENST00000487617 SEC22AQ96IW7 307 aa15.53■□□□□ 0.08
HDAC4-209ENST00000487617 H3BMQ9 156 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 IGKV1-39P01597 117 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 IGKV1D-39P04432 117 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 SSBP1Q04837 148 aaKnown RBP15.52■□□□□ 0.08
HDAC4-209ENST00000487617 IL18Q14116 193 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 SLC25A24Q6NUK1 477 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 GPHB5Q86YW7 130 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 Q8N402 240 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 OR5B3Q8NH48 314 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 TERB2Q8NHR7 220 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 MRGPRFQ96AM1 343 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 ISOC1Q96CN7 298 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 C6orf62Q9GZU0 229 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-209ENST00000487617 TMEM14BQ9NUH8 114 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 U3KQK5 164 aa15.52■□□□□ 0.08
HDAC4-209ENST00000487617 DBX1A6NMT0 343 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 C15orf61A6NNL5 157 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 LGALS9O00182 355 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 CLEC3BP05452 202 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 FRMD6-AS1P0C7T7 363 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 MECP2P51608 486 aaKnown RBP15.51■□□□□ 0.07
HDAC4-209ENST00000487617 FAM106AQ4KMX7 169 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 ADAMTSL5Q6ZMM2 481 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 Q8N1Y9 231 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 OR4A16Q8NH70 328 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 ZNF502Q8TBZ5 544 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 ZFAND1Q8TCF1 268 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 DYNLRB2Q8TF09 96 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 SMIM4Q8WVI0 70 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 TMEM56Q96MV1 263 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 ZC4H2Q9NQZ6 224 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 RABL2AQ9UBK7 228 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-209ENST00000487617 RABL2BQ9UNT1 228 aa15.51■□□□□ 0.07
HDAC4-209ENST00000487617 ZNF320A2RRD8 509 aa15.5■□□□□ 0.07
HDAC4-209ENST00000487617 IZUMO1RA6ND01 250 aa15.5■□□□□ 0.07
HDAC4-209ENST00000487617 C2orf70A6NJV1 201 aa15.5■□□□□ 0.07
HDAC4-209ENST00000487617 GPR183P32249 361 aa15.5■□□□□ 0.07
HDAC4-209ENST00000487617 SBSPONQ8IVN8 264 aa15.5■□□□□ 0.07
HDAC4-209ENST00000487617 SGPP2Q8IWX5 399 aa15.5■□□□□ 0.07
HDAC4-209ENST00000487617 OR13C8Q8NGS7 320 aa15.5■□□□□ 0.07
HDAC4-209ENST00000487617 OR2K2Q8NGT1 345 aa15.5■□□□□ 0.07
HDAC4-209ENST00000487617 COPZ2Q9P299 210 aa15.5■□□□□ 0.07
HDAC4-209ENST00000487617 F11RQ9Y624 299 aaKnown RBP15.5■□□□□ 0.07
HDAC4-209ENST00000487617 CTDSPLO15194 276 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 FOLR2P14207 255 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 MEF2DQ14814 521 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 CD300EQ496F6 205 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-209ENST00000487617 FAAP20Q6NZ36 180 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 GTSCR1Q86UQ5 136 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 CCDC71LQ8N9Z2 235 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 MARCH1Q8TCQ1 289 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 VN1R17PQ8TDU5 208 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 WWC2-AS2Q96NR7 200 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 TP53RKQ96S44 253 aa15.49■□□□□ 0.07
HDAC4-209ENST00000487617 SLIRPQ9GZT3 109 aaKnown RBP15.49■□□□□ 0.07
HDAC4-209ENST00000487617 C3orf85A0A1B0GTC6 90 aa15.48■□□□□ 0.07
HDAC4-209ENST00000487617 IGHV4-30-4P0DP06 118 aa15.48■□□□□ 0.07
HDAC4-209ENST00000487617 EDN2P20800 178 aa15.48■□□□□ 0.07
HDAC4-209ENST00000487617 MFAP2P55001 183 aa15.48■□□□□ 0.07
HDAC4-209ENST00000487617 PLET1Q6UQ28 207 aa15.48■□□□□ 0.07
HDAC4-209ENST00000487617 COL7A1Q02388 2944 aa15.47■□□□□ 0.07
HDAC4-209ENST00000487617 DNAH9Q9NYC9 4486 aa15.47■□□□□ 0.07
HDAC4-209ENST00000487617 DISC1C4P0D8 188 aa15.47■□□□□ 0.07
HDAC4-209ENST00000487617 CTSDP07339 412 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-209ENST00000487617 AKAIN1P0CW23 69 aa15.47■□□□□ 0.07
HDAC4-209ENST00000487617 IZUMO4Q1ZYL8 232 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms