RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 PUSL1Q8N0Z8 303 aaKnown RBP10.67□□□□□ -0.7
ATG9A-220ENST00000475339 TMEM167AQ8TBQ9 72 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 ZFAND1Q8TCF1 268 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 ZNF486Q96H40 463 aaPredicted RBP10.67□□□□□ -0.7
ATG9A-220ENST00000475339 FYTTD1Q96QD9 318 aaKnown RBP10.67□□□□□ -0.7
ATG9A-220ENST00000475339 SLC2A9Q9NRM0 540 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 TMEM140Q9NV12 185 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 COA4Q9NYJ1 87 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 BET1LQ9NYM9 111 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 DNAH2Q9P225 4427 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 DPPA5A6NC42 116 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 LINC01619G3V211 115 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 RPA2P15927 270 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 HLA-GP17693 338 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 PI3P19957 117 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 LPAR6P43657 344 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 RPL27AP46776 148 aaKnown RBP10.66□□□□□ -0.7
ATG9A-220ENST00000475339 PIGPP57054 158 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 MRGPRG-AS1Q2M3A8 158 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 LGALS9CQ6DKI2 356 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
ATG9A-220ENST00000475339 LINC00322Q6ZN03 302 aaPredicted RBP10.66□□□□□ -0.7
ATG9A-220ENST00000475339 LHFPL1Q86WI0 220 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 CCDC71LQ8N9Z2 235 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 OR4C16Q8NGL9 310 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 TERB2Q8NHR7 220 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 PRRT1Q99946 306 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 MCUBQ9NWR8 336 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 COPZ2Q9P299 210 aa10.66□□□□□ -0.7
ATG9A-220ENST00000475339 C14orf166Q9Y224 244 aaKnown RBP10.66□□□□□ -0.7
ATG9A-220ENST00000475339 C13orf42A0A1B0GVH6 325 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 MARCH11A6NNE9 402 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 SERPINE2P07093 398 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 OR9G9P0C7N8 305 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 FAUP35544 74 aaKnown RBP10.65□□□□□ -0.7
ATG9A-220ENST00000475339 AP3S2P59780 193 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 POU2AF1Q16633 256 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 SLC25A42Q86VD7 318 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 Q8N402 240 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 OR13C8Q8NGS7 320 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 SOSTQ9BQB4 213 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 THAP7Q9BT49 309 aaPredicted RBP10.65□□□□□ -0.7
ATG9A-220ENST00000475339 COMMD5Q9GZQ3 224 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 V9GYH0 126 aa10.65□□□□□ -0.7
ATG9A-220ENST00000475339 IGHV4OR15-8A0A075B7B6 117 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 A0A087WW49 117 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 A0A0G2JLM5 398 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 ANKRD20A5PA0PJZ0 165 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 UPK2O00526 184 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 SNAPC5O75971 98 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 KRASP01116 189 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 IGHV3-11P01762 117 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 LGALS1P09382 135 aaKnown RBP10.64□□□□□ -0.71
ATG9A-220ENST00000475339 PTBP1P26599 531 aaKnown RBP eCLIP10.64□□□□□ -0.71
ATG9A-220ENST00000475339 G6PCP35575 357 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 RND3P61587 244 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 CCDC190Q86UF4 302 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 MARCH1Q8TCQ1 289 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 FAM212BQ9NTI7 297 aaPredicted RBP10.64□□□□□ -0.71
ATG9A-220ENST00000475339 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
ATG9A-220ENST00000475339 A0A1B0GVY2 172 aa10.63□□□□□ -0.71
ATG9A-220ENST00000475339 HMX3A6NHT5 357 aa10.63□□□□□ -0.71
ATG9A-220ENST00000475339 H0Y980 276 aa10.63□□□□□ -0.71
ATG9A-220ENST00000475339 CTSDP07339 412 aaPredicted RBP10.63□□□□□ -0.71
ATG9A-220ENST00000475339 ZNF735P0CB33 412 aa10.63□□□□□ -0.71
ATG9A-220ENST00000475339 INPP1P49441 399 aa10.63□□□□□ -0.71
ATG9A-220ENST00000475339 SURF2Q15527 256 aaPredicted RBP10.63□□□□□ -0.71
ATG9A-220ENST00000475339 TRIM16LQ309B1 348 aa10.63□□□□□ -0.71
ATG9A-220ENST00000475339 ZNF585BQ52M93 769 aa10.63□□□□□ -0.71
ATG9A-220ENST00000475339 TOMM5Q8N4H5 51 aa10.63□□□□□ -0.71
ATG9A-220ENST00000475339 ADAD2Q8NCV1 583 aaKnown RBP10.63□□□□□ -0.71
ATG9A-220ENST00000475339 OR51S1Q8NGJ8 323 aa10.63□□□□□ -0.71
ATG9A-220ENST00000475339 TEX13DA0A0J9YY54 714 aaPredicted RBP10.62□□□□□ -0.71
ATG9A-220ENST00000475339 C3orf85A0A1B0GTC6 90 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 TEX22C9J3V5 150 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 ATG12O94817 140 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 DHFRP00374 187 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 PRR20EP86478 221 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 PRR20CP86479 221 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 PRR20DP86480 221 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 PRR20BP86481 221 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 PRR20AP86496 221 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 TRIQKQ629K1 86 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 GTSCR1Q86UQ5 136 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 TRIM63Q969Q1 353 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 MRGPRFQ96AM1 343 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 SCGB3A2Q96PL1 93 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 TSC22D3Q99576 134 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 ELOVL1Q9BW60 279 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 QTRT1Q9BXR0 403 aaKnown RBP10.62□□□□□ -0.71
ATG9A-220ENST00000475339 PLEKHA3Q9HB20 300 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 SLC2A8Q9NY64 477 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 PRNDQ9UKY0 176 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 ZNF257Q9Y2Q1 563 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 KLK5Q9Y337 293 aaPredicted RBP10.62□□□□□ -0.71
ATG9A-220ENST00000475339 HSPG2P98160 4391 aa10.62□□□□□ -0.71
ATG9A-220ENST00000475339 TRAV3A0A0B4J244 114 aa10.61□□□□□ -0.71
ATG9A-220ENST00000475339 NPIPB5A8MRT5 1133 aa10.61□□□□□ -0.71
ATG9A-220ENST00000475339 RBMXL2O75526 392 aaKnown RBP10.61□□□□□ -0.71
ATG9A-220ENST00000475339 B3GALNT1O75752 331 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms