RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 H3BUA1 57 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 RBMXL2O75526 392 aaKnown RBP12.53□□□□□ -0.4
GPC1-207ENST00000466624 TRAPPC2P0DI81 140 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 TRAPPC2BP0DI82 140 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 SULT1A3P0DMM9 295 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 SULT1A4P0DMN0 295 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 MYOD1P15172 320 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 SPNP16150 400 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 KRTAP10-3P60369 221 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 FOXE3Q13461 319 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 TTC9CQ8N5M4 171 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 C3orf56Q8N813 242 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 OR52E5Q8NH55 327 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 FAM110DQ8TAY7 271 aaPredicted RBP12.53□□□□□ -0.4
GPC1-207ENST00000466624 FYTTD1Q96QD9 318 aaKnown RBP12.53□□□□□ -0.4
GPC1-207ENST00000466624 CACNG5Q9UF02 275 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 TENM1Q9UKZ4 2725 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 A0A1W2PN81 502 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 NPIPB5A8MRT5 1133 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 FBXO24O75426 580 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 OPN1MWP04001 364 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 OPN1MW2P0DN77 364 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 OPN1MW3P0DN78 364 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 PSMB8P28062 276 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 CHRNA7P36544 502 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 PRCDQ00LT1 54 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 SMCO1Q147U7 214 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 PDLIM3Q53GG5 364 aaPredicted RBP12.52□□□□□ -0.41
GPC1-207ENST00000466624 SHISA2Q6UWI4 295 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 C10orf99Q6UWK7 81 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 ZNF329Q86UD4 541 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 MRPL41Q8IXM3 137 aaKnown RBP12.52□□□□□ -0.41
GPC1-207ENST00000466624 C12orf45Q8N5I9 185 aaPredicted RBP12.52□□□□□ -0.41
GPC1-207ENST00000466624 SPATA3Q8NHX4 192 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 PDCD10Q9BUL8 212 aa12.52□□□□□ -0.41
GPC1-207ENST00000466624 STAB1Q9NY15 2570 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 IGLC7A0M8Q6 106 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 HMX3A6NHT5 357 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 INS-IGF2F8WCM5 200 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 ST8SIA3O43173 380 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 SOX15O60248 233 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 IFNA21P01568 189 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 CRYGCP07315 174 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 HOXB5P09067 269 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 CD83Q01151 205 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 OXA1LQ15070 435 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 CXorf66Q5JRM2 361 aaPredicted RBP12.51□□□□□ -0.41
GPC1-207ENST00000466624 GGNBP1Q5YKI7 109 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 SLA2Q9H6Q3 261 aa12.51□□□□□ -0.41
GPC1-207ENST00000466624 PITX3O75364 302 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 ADAP1O75689 374 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 IFNA17P01571 189 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 CD28P10747 220 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 CTRB1P17538 263 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 PSMB6P28072 239 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 SPCS3P61009 180 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 KLK9Q2XQG4 91 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 TCTEX1D4Q5JR98 221 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 CTRB2Q6GPI1 263 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 MYOZ3Q8TDC0 251 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 KLK9Q9UKQ9 250 aa12.5□□□□□ -0.41
GPC1-207ENST00000466624 C7orf66A4D0T2 115 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 FAM90A26D6RGX4 464 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 AREGP15514 252 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 WT1-ASQ06250 92 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 TMEM65Q6PI78 240 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 OR5T1Q8NG75 326 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 OR10W1Q8NGF6 305 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 OR1S1Q8NH92 325 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 HINT2Q9BX68 163 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 PLEKHA3Q9HB20 300 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 ZFP57Q9NU63 452 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 HSPB7Q9UBY9 170 aa12.49□□□□□ -0.41
GPC1-207ENST00000466624 APELAP0DMC3 54 aa12.48□□□□□ -0.41
GPC1-207ENST00000466624 PF4V1P10720 104 aa12.48□□□□□ -0.41
GPC1-207ENST00000466624 RAB9AP51151 201 aa12.48□□□□□ -0.41
GPC1-207ENST00000466624 TATDN3Q17R31 274 aa12.48□□□□□ -0.41
GPC1-207ENST00000466624 TSSC4Q9Y5U2 329 aaPredicted RBP12.48□□□□□ -0.41
GPC1-207ENST00000466624 TRBV9A0A0B4J1U6 114 aa12.47□□□□□ -0.41
GPC1-207ENST00000466624 TCRBV4S1A1TA0A5B7 111 aa12.47□□□□□ -0.41
GPC1-207ENST00000466624 RPLP1P05386 114 aaKnown RBP12.47□□□□□ -0.41
GPC1-207ENST00000466624 OR13C7P0DN81 318 aa12.47□□□□□ -0.41
GPC1-207ENST00000466624 HIST1H1BP16401 226 aaKnown RBP12.47□□□□□ -0.41
GPC1-207ENST00000466624 ERHP84090 104 aaKnown RBP12.47□□□□□ -0.41
GPC1-207ENST00000466624 TNFRSF9Q07011 255 aa12.47□□□□□ -0.41
GPC1-207ENST00000466624 SRSF4Q08170 494 aaKnown RBP12.47□□□□□ -0.41
GPC1-207ENST00000466624 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
GPC1-207ENST00000466624 OR2C3Q8N628 320 aa12.47□□□□□ -0.41
GPC1-207ENST00000466624 ZNF114Q8NC26 417 aa12.47□□□□□ -0.41
GPC1-207ENST00000466624 OR1L6Q8NGR2 347 aa12.47□□□□□ -0.41
GPC1-207ENST00000466624 CITED2Q99967 270 aaPredicted RBP12.47□□□□□ -0.41
GPC1-207ENST00000466624 MPTX1A8MV57 137 aa12.46□□□□□ -0.41
GPC1-207ENST00000466624 CYB5BO43169 146 aa12.46□□□□□ -0.41
GPC1-207ENST00000466624 CDX1P47902 265 aaPredicted RBP12.46□□□□□ -0.41
GPC1-207ENST00000466624 HOXA1P49639 335 aaPredicted RBP12.46□□□□□ -0.41
GPC1-207ENST00000466624 RPL23AP62750 156 aaKnown RBP12.46□□□□□ -0.41
GPC1-207ENST00000466624 KIAA0141Q14154 515 aaPredicted RBP12.46□□□□□ -0.41
GPC1-207ENST00000466624 C11orf44Q8N8P7 122 aa12.46□□□□□ -0.41
GPC1-207ENST00000466624 UXS1Q8NBZ7 420 aa12.46□□□□□ -0.41
GPC1-207ENST00000466624 OR4D5Q8NGN0 318 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms