RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ENY2Q9NPA8 101 aa14.81□□□□□ -0.04
COL9A3-205ENST00000466192 A0A1W2PPH5 198 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 C5orf52A6NGY3 159 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 A6NNC1 897 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 HSPB1P04792 205 aaKnown RBP14.8□□□□□ -0.04
COL9A3-205ENST00000466192 TMEM177Q53S58 311 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 TGIF2LXQ8IUE1 241 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 CYB561D1Q8N8Q1 229 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 LY6G5BQ8NDX9 201 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 OR10G4Q8NGN3 311 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 OR10G9Q8NGN4 311 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 OR10G7Q8NGN6 311 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 HARBI1Q96MB7 349 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 PRNDQ9UKY0 176 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 PUS1Q9Y606 427 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL9A3-205ENST00000466192 LOC102723971A0A1B0GUV8 181 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 PRSS46E5RG02 174 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 UBE2CO00762 179 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 IGLV1-47P01700 117 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 RAB11AP62491 216 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 KHDC3LQ587J8 217 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 LHX4Q969G2 390 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 PATZ1Q9HBE1 687 aaKnown RBP14.8□□□□□ -0.04
COL9A3-205ENST00000466192 BET1LQ9NYM9 111 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 WDR83OSQ9Y284 106 aa14.8□□□□□ -0.04
COL9A3-205ENST00000466192 C7orf77A4D0Y5 90 aa14.79□□□□□ -0.04
COL9A3-205ENST00000466192 C17orf112F2Z3M2 114 aa14.79□□□□□ -0.04
COL9A3-205ENST00000466192 RBP4P02753 201 aa14.79□□□□□ -0.04
COL9A3-205ENST00000466192 SLC16A13Q7RTY0 426 aa14.79□□□□□ -0.04
COL9A3-205ENST00000466192 C15orf54Q8N8G6 183 aa14.79□□□□□ -0.04
COL9A3-205ENST00000466192 SLC24A4Q8NFF2 622 aa14.79□□□□□ -0.04
COL9A3-205ENST00000466192 TNFRSF14Q92956 283 aa14.79□□□□□ -0.04
COL9A3-205ENST00000466192 FLYWCH2Q96CP2 140 aaKnown RBP14.79□□□□□ -0.04
COL9A3-205ENST00000466192 USP9XQ93008 2570 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-205ENST00000466192 MBP02144 154 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 BCL2P10415 239 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 DEFA4P12838 97 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 NPY1RP25929 384 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 PDPNQ86YL7 162 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 Q8N7P7 452 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 CLEC7AQ9BXN2 247 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 UNKLQ9H9P5 680 aaKnown RBP14.78□□□□□ -0.04
COL9A3-205ENST00000466192 KBTBD11O94819 623 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 LIPFP07098 398 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 IL3RAP26951 378 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 HLA-DRB5Q30154 266 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 TREML4Q6UXN2 200 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 ZNF600Q6ZNG1 722 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 OR4C13Q8NGP0 309 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 PCGF1Q9BSM1 259 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 OR51M1Q9H341 326 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 SMCO4Q9NRQ5 59 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 ONECUT1Q9UBC0 465 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 ZNF257Q9Y2Q1 563 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 WASHC3Q9Y3C0 194 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 DOPEY1Q5JWR5 2465 aa14.78□□□□□ -0.04
COL9A3-205ENST00000466192 CA2P00918 260 aa14.77□□□□□ -0.04
COL9A3-205ENST00000466192 PRRX1P54821 245 aa14.77□□□□□ -0.04
COL9A3-205ENST00000466192 RBMS3Q6XE24 437 aaKnown RBP14.77□□□□□ -0.04
COL9A3-205ENST00000466192 GGACTQ9BVM4 153 aa14.77□□□□□ -0.04
COL9A3-205ENST00000466192 PLEKHA3Q9HB20 300 aa14.77□□□□□ -0.04
COL9A3-205ENST00000466192 PLXNB1O43157 2135 aa14.77□□□□□ -0.05
COL9A3-205ENST00000466192 TEX50A0A1B0GTY4 177 aa14.77□□□□□ -0.05
COL9A3-205ENST00000466192 COX7A1P24310 79 aa14.77□□□□□ -0.05
COL9A3-205ENST00000466192 PRCDQ00LT1 54 aa14.77□□□□□ -0.05
COL9A3-205ENST00000466192 RNF212Q495C1 297 aa14.77□□□□□ -0.05
COL9A3-205ENST00000466192 TCEAL7Q9BRU2 100 aa14.77□□□□□ -0.05
COL9A3-205ENST00000466192 SSBP3Q9BWW4 388 aaPredicted RBP14.77□□□□□ -0.05
COL9A3-205ENST00000466192 NIT2Q9NQR4 276 aa14.77□□□□□ -0.05
COL9A3-205ENST00000466192 CTXND1A0A1B0GTU2 59 aa14.76□□□□□ -0.05
COL9A3-205ENST00000466192 C1orf196B1AJZ1 125 aa14.76□□□□□ -0.05
COL9A3-205ENST00000466192 GPR6P46095 362 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-205ENST00000466192 BEND2Q8NDZ0 799 aa14.76□□□□□ -0.05
COL9A3-205ENST00000466192 ACTR3CQ9C0K3 210 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-205ENST00000466192 TMPRSS5Q9H3S3 457 aa14.76□□□□□ -0.05
COL9A3-205ENST00000466192 IGHV3-72A0A0B4J1Y9 119 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 H3BQ15 152 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 BUB1B-PAK6H3BSN5 160 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 IGLV2-23P01705 113 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 S100PP25815 95 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 DLK1P80370 383 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 GCSAMLQ5JQS6 135 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 RAB24Q969Q5 203 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 RITA1Q96K30 269 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 MYO18BQ8IUG5 2567 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 hCG_1809904A0A1W2PP81 198 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 A0A1W2PPE2 198 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 A0A1W2PR64 198 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 A0A1W2PRV1 198 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 MPDU1O75352 247 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 PRB1P04280 392 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 MC5RP33032 325 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 EFNA4P52798 201 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 ARF6P62330 175 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 ARSJQ5FYB0 599 aaPredicted RBP14.75□□□□□ -0.05
COL9A3-205ENST00000466192 OR4P4Q8NGL7 312 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 MGST2Q99735 147 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 FKBP11Q9NYL4 201 aa14.75□□□□□ -0.05
COL9A3-205ENST00000466192 WNK2Q9Y3S1 2297 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 LOC105371242A0A075B767 164 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms