RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 OR51G1Q8NGK1 321 aa13.4□□□□□ -0.26
PIKFYVE-206ENST00000443896 GATAD1Q8WUU5 269 aa13.4□□□□□ -0.26
PIKFYVE-206ENST00000443896 TMEM170AQ8WVE7 144 aa13.4□□□□□ -0.26
PIKFYVE-206ENST00000443896 BTF3L4Q96K17 158 aa13.4□□□□□ -0.26
PIKFYVE-206ENST00000443896 RAB9BQ9NP90 201 aa13.4□□□□□ -0.26
PIKFYVE-206ENST00000443896 BCL2P10415 239 aa13.39□□□□□ -0.27
PIKFYVE-206ENST00000443896 KRTDAPP60985 99 aa13.39□□□□□ -0.27
PIKFYVE-206ENST00000443896 BSXQ3C1V8 233 aa13.39□□□□□ -0.27
PIKFYVE-206ENST00000443896 TXN2Q99757 166 aa13.39□□□□□ -0.27
PIKFYVE-206ENST00000443896 TNFSF4P23510 183 aa13.39□□□□□ -0.27
PIKFYVE-206ENST00000443896 ELOVL5Q9NYP7 299 aa13.39□□□□□ -0.27
PIKFYVE-206ENST00000443896 TRAPPC1Q9Y5R8 145 aa13.39□□□□□ -0.27
PIKFYVE-206ENST00000443896 KBTBD11-OT1A0A1B0GTJ5 212 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 NKX6-3A6NJ46 265 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 IGHV3-7P01780 117 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 SPINK9Q5DT21 86 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 DUX4L9Q6RFH8 374 aaPredicted RBP13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 TMEM108Q6UXF1 575 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 Q8NA96 180 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 OR4C5Q8NGB2 326 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 GAFA1Q96PS6 74 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 MANBALQ9NQG1 85 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 DSCAMO60469 2012 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 C16orf97H3BN30 126 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 IGKV1D-33P01593 117 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 IGKV1-33P01594 117 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 UTF1Q5T230 341 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 RPP25LQ8N5L8 163 aaKnown RBP13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 DDB2Q92466 427 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 MAP1LC3B2A6NCE7 125 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 CDKN1BP46527 198 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 Q5PR19 223 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 ACSM6Q6P461 480 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 OR2T10Q8NGZ9 312 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 FAM122AQ96E09 287 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 MAP1LC3BQ9GZQ8 125 aa13.38□□□□□ -0.27
PIKFYVE-206ENST00000443896 C15orf62A8K5M9 175 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 KIR2DS2P43631 304 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 Q6ZN92 141 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 C1orf229Q6ZS94 237 aaPredicted RBP13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 CISD2Q8N5K1 135 aaKnown RBP13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 ACY3Q96HD9 319 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 S1PR3Q99500 378 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 FAM234AQ9H0X4 552 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 F2Z2F3 143 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 DEFA4P12838 97 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 PDLIM3Q53GG5 364 aaPredicted RBP13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 CT45A1Q5HYN5 189 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 PRAMEF5Q5TYX0 476 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 CT45A3Q8NHU0 189 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 CMTM2Q8TAZ6 248 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 LOC105371242A0A075B767 164 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 TRGV10A0A0A0MS01 117 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 PGPEP1LA6NFU8 196 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 TMEM241Q24JQ0 296 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 TEX36Q5VZQ5 186 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 ZNF788Q6ZQV5 615 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 OR52E5Q8NH55 327 aa13.37□□□□□ -0.27
PIKFYVE-206ENST00000443896 SELENOTP62341 195 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 PNRC1Q12796 327 aaPredicted RBP13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 LDLRAD2Q5SZI1 272 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 LEAP2Q969E1 77 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 P2RX4Q99571 388 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 NPCDR1Q9BY65 106 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 JKAMPQ9P055 326 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 RNF114Q9Y508 228 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 NBEAQ8NFP9 2946 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 DSCAML1Q8TD84 2053 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 ERVK-16P61578 105 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 RPS16P62249 146 aaKnown RBP13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 RPL23P62829 140 aaKnown RBP13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 TFF3Q07654 80 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 TMEM183BQ1AE95 376 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 ASCL5Q7RTU5 278 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 DEFB108BQ8NET1 73 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 OR4A16Q8NH70 328 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 LRFN3Q9BTN0 628 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 LINC00574Q9H8X3 128 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 SLC39A9Q9NUM3 307 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 TMEM106BQ9NUM4 274 aa13.36□□□□□ -0.27
PIKFYVE-206ENST00000443896 CCL13Q99616 98 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 SAMD10Q9BYL1 202 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 ZNF835Q9Y2P0 537 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 GVINP1Q7Z2Y8 2422 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 DPRXA6NFQ7 191 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 GYPAP02724 150 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 RELBQ01201 579 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 ACTL10Q5JWF8 245 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 TGIF2LYQ8IUE0 185 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 VKORC1L1Q8N0U8 176 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 LHX4Q969G2 390 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 ZC2HC1AQ96GY0 325 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 WNT10AQ9GZT5 417 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 TP73-AS1Q9UF72 201 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 RAI1Q7Z5J4 1906 aaPredicted RBP13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 CEP250Q9BV73 2442 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 SAA2-SAA4A0A096LPE2 208 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 SAA2P0DJI9 122 aaPredicted RBP13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 COA6Q5JTJ3 125 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms