RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 LY6EQ16553 131 aa12.66□□□□□ -0.38
MCF2L-217ENST00000441756 ZNF562Q6V9R5 426 aa12.66□□□□□ -0.38
MCF2L-217ENST00000441756 STX12Q86Y82 276 aa12.66□□□□□ -0.38
MCF2L-217ENST00000441756 OR2C3Q8N628 320 aa12.66□□□□□ -0.38
MCF2L-217ENST00000441756 TMEM86BQ8N661 226 aa12.66□□□□□ -0.38
MCF2L-217ENST00000441756 C5orf56Q8N8D9 126 aa12.66□□□□□ -0.38
MCF2L-217ENST00000441756 GRPEL2Q8TAA5 225 aa12.66□□□□□ -0.38
MCF2L-217ENST00000441756 SRSF12Q8WXF0 261 aaKnown RBP12.66□□□□□ -0.38
MCF2L-217ENST00000441756 VPREB3Q9UKI3 123 aa12.66□□□□□ -0.38
MCF2L-217ENST00000441756 STRAPQ9Y3F4 350 aaKnown RBP12.66□□□□□ -0.38
MCF2L-217ENST00000441756 MYO9AB2RTY4 2548 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 NOTCH2Q04721 2471 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 IGHV4-59P01825 116 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 SRD5A1P18405 259 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 BAXQ07812 192 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 FXYD3Q14802 87 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 MRGPRG-AS1Q2M3A8 158 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 FBLN7Q53RD9 439 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 SPINK9Q5DT21 86 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 TMEM219Q86XT9 240 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 ARPC1AQ92747 370 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 U3KQ87 197 aa12.65□□□□□ -0.38
MCF2L-217ENST00000441756 IFNA10P01566 189 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 OPN1MWP04001 364 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 OPN1MW2P0DN77 364 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 OPN1MW3P0DN78 364 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 SNCAP37840 140 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 HTR2BP41595 481 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 VDAC2P45880 294 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-217ENST00000441756 NKX2-5P52952 324 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-217ENST00000441756 SUB1P53999 127 aaKnown RBP eCLIP12.64□□□□□ -0.39
MCF2L-217ENST00000441756 RAB11AP62491 216 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 SPANXN5Q5MJ07 72 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 C10orf55Q5SWW7 151 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 C9orf62Q8N4C0 152 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 SIGLECL1Q8N7X8 197 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 ABHD5Q8WTS1 349 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 ZNF48Q96MX3 618 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-217ENST00000441756 TEX15Q9BXT5 2789 aa12.64□□□□□ -0.39
MCF2L-217ENST00000441756 RNF222A6NCQ9 220 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 H3BP45 60 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 FCN1O00602 326 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 KCNAB3O43448 404 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 OR8U8P0C7N1 319 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 HKR1P10072 659 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 MYOD1P15172 320 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 PAX9P55771 341 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 HBG1P69891 147 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 HBG2P69892 147 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 CX3CL1P78423 397 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 TUSC1Q2TAM9 212 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 KCNRGQ8N5I3 272 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 SLC24A4Q8NFF2 622 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 SMR3AQ99954 134 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 HSPB11Q9Y547 144 aa12.63□□□□□ -0.39
MCF2L-217ENST00000441756 FAM24AA6NFZ4 105 aa12.62□□□□□ -0.39
MCF2L-217ENST00000441756 CYB5BO43169 146 aa12.62□□□□□ -0.39
MCF2L-217ENST00000441756 HOXA3O43365 443 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-217ENST00000441756 TSPAN9O75954 239 aa12.62□□□□□ -0.39
MCF2L-217ENST00000441756 TMEM50AO95807 157 aa12.62□□□□□ -0.39
MCF2L-217ENST00000441756 NPY1RP25929 384 aa12.62□□□□□ -0.39
MCF2L-217ENST00000441756 S100A11P31949 105 aa12.62□□□□□ -0.39
MCF2L-217ENST00000441756 SULT1A1P50225 295 aa12.62□□□□□ -0.39
MCF2L-217ENST00000441756 AP2S1P53680 142 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-217ENST00000441756 EWSR1Q01844 656 aaKnown RBP eCLIP12.62□□□□□ -0.39
MCF2L-217ENST00000441756 TMEM252Q8N6L7 170 aa12.62□□□□□ -0.39
MCF2L-217ENST00000441756 ARL6Q9H0F7 186 aa12.62□□□□□ -0.39
MCF2L-217ENST00000441756 PAIP2BQ9ULR5 123 aaKnown RBP12.62□□□□□ -0.39
MCF2L-217ENST00000441756 CSMD1Q96PZ7 3565 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 IGHV7-81A0A0B4J1V7 117 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 KANTRA0A1W2PQU2 76 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 IGLC7A0M8Q6 106 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 IGSF23A1L1A6 192 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 TAAR5O14804 337 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 OR13C7P0DN81 318 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 CXCL2P19875 107 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 LGALSLQ3ZCW2 172 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-217ENST00000441756 C2orf83Q53S99 150 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 TMEM14EPQ6UXP3 125 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 TMUB2Q71RG4 321 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 OR10W1Q8NGF6 305 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 OR1L6Q8NGR2 347 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 ZNF418Q8TF45 676 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-217ENST00000441756 PINX1Q96BK5 328 aaKnown RBP12.61□□□□□ -0.39
MCF2L-217ENST00000441756 TMEM68Q96MH6 324 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 VPS13CQ709C8 3753 aa12.61□□□□□ -0.39
MCF2L-217ENST00000441756 MSGN1A6NI15 193 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 CGB1A6NKQ9 187 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 TEX22C9J3V5 150 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 SSBP2P81877 361 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-217ENST00000441756 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-217ENST00000441756 STPG2Q8N412 459 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 ZNF114Q8NC26 417 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 OR10P1Q8NGE3 313 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 OR1S2Q8NGQ3 325 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 OR4C12Q96R67 309 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 ARPC5LQ9BPX5 153 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 NPFFR1Q9GZQ6 430 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 PARP11Q9NR21 331 aa12.6□□□□□ -0.39
MCF2L-217ENST00000441756 MAP1AP78559 2803 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms