RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CEACAM4O75871 244 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 ACTL6BO94805 426 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 IGHV1-46P01743 117 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 IGKV1-16P04430 117 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 RHOBP62745 196 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 RPL31P62899 125 aaKnown RBP9.68□□□□□ -0.86
CD44-209ENST00000433892 STUMQ69YW2 141 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.68□□□□□ -0.86
CD44-209ENST00000433892 OR4P4Q8NGL7 312 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 FAM222BQ8WU58 562 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 GAFA1Q96PS6 74 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 TXNDC17Q9BRA2 123 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 DCAF16Q9NXF7 216 aa9.68□□□□□ -0.86
CD44-209ENST00000433892 A0A1B0GUS0 222 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 TIMP3P35625 211 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 GATA4P43694 442 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 FAM27E3Q08E93 113 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 RAB31Q13636 194 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 MOB3BQ86TA1 216 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 ZNF439Q8NDP4 499 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 RAB9BQ9NP90 201 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 ELOVL5Q9NYP7 299 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 ANKRD11Q6UB99 2663 aaPredicted RBP9.67□□□□□ -0.86
CD44-209ENST00000433892 SRRM4A7MD48 611 aaKnown RBP9.67□□□□□ -0.86
CD44-209ENST00000433892 J3QR06 171 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 RPL29P47914 159 aaKnown RBP9.67□□□□□ -0.86
CD44-209ENST00000433892 SELENOVP59797 346 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 TEX38Q6PEX7 206 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 MRPL41Q8IXM3 137 aaKnown RBP9.67□□□□□ -0.86
CD44-209ENST00000433892 TMEM18Q96B42 140 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 LRFN3Q9BTN0 628 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 NCOR1P1Q9H4R4 102 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 IL19Q9UHD0 177 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 TP53TG5Q9Y2B4 290 aa9.67□□□□□ -0.86
CD44-209ENST00000433892 K7EN84 100 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 CT45A6P0DMU7 189 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 CT45A5P0DMU8 189 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 CT45A7P0DMV0 189 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 PRR20EP86478 221 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 PRR20CP86479 221 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 PRR20DP86480 221 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 PRR20BP86481 221 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 PRR20AP86496 221 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 HLA-DRB5Q30154 266 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 MIR17HGQ75NE6 70 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 ZNF664Q8N3J9 261 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 OR10G8Q8NGN5 311 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 ADTRPQ96IZ2 230 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 PLEKHA3Q9HB20 300 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 TANC2Q9HCD6 1990 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 GVINP1Q7Z2Y8 2422 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 RAI1Q7Z5J4 1906 aaPredicted RBP9.66□□□□□ -0.86
CD44-209ENST00000433892 SLC17A3O00476 420 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 LINC00869P0C866 280 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 GATA2P23769 480 aaPredicted RBP9.66□□□□□ -0.86
CD44-209ENST00000433892 C1orf185Q5T7R7 199 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 TMEM256Q8N2U0 113 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 RND1Q92730 232 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 NEUROG1Q92886 237 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 PIEZO2Q9H5I5 2752 aa9.66□□□□□ -0.86
CD44-209ENST00000433892 GCGP01275 180 aa9.65□□□□□ -0.86
CD44-209ENST00000433892 ZNF788Q6ZQV5 615 aa9.65□□□□□ -0.86
CD44-209ENST00000433892 REC114Q7Z4M0 266 aa9.65□□□□□ -0.86
CD44-209ENST00000433892 GBGT1Q8N5D6 347 aa9.65□□□□□ -0.86
CD44-209ENST00000433892 SLC35D1Q9NTN3 355 aa9.65□□□□□ -0.86
CD44-209ENST00000433892 PRNDQ9UKY0 176 aa9.65□□□□□ -0.86
CD44-209ENST00000433892 RIF1Q5UIP0 2472 aaKnown RBP9.65□□□□□ -0.87
CD44-209ENST00000433892 IGKV1OR2-108A0A075B7D4 117 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 K7EM74 188 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 UPK2O00526 184 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 MT-CO2P00403 227 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 NDUFB7P17568 137 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 CCL8P80075 99 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 PSG5Q15238 335 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 POU2AF1Q16633 256 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 MLANAQ16655 118 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 SLC25A48Q6ZT89 311 aaKnown RBP9.65□□□□□ -0.87
CD44-209ENST00000433892 BTF3L4Q96K17 158 aa9.65□□□□□ -0.87
CD44-209ENST00000433892 RPUSD1Q9UJJ7 312 aaKnown RBP9.65□□□□□ -0.87
CD44-209ENST00000433892 TEX50A0A1B0GTY4 177 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 NUPR1O60356 82 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 OR4A8P0C604 315 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 TNFSF4P23510 183 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 CD40P25942 277 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 ADMP35318 185 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 PRCDQ00LT1 54 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 ZNF90Q03938 601 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 RTL8BQ17RB0 113 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 C3orf36Q3SXR2 165 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 ZCCHC24Q8N2G6 241 aaKnown RBP9.64□□□□□ -0.87
CD44-209ENST00000433892 UHRF2Q96PU4 802 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 NABP2Q9BQ15 211 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 SLC45A2Q9UMX9 530 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 DYSFO75923 2080 aa9.64□□□□□ -0.87
CD44-209ENST00000433892 ZFHX2Q9C0A1 2572 aaPredicted RBP9.63□□□□□ -0.87
CD44-209ENST00000433892 GRIFINA4D1Z8 144 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 A8MWP6 167 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 IRF2P14316 349 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 PAX1P15863 534 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms