RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SNURFLB1AK76 121 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 UCNP55089 124 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 KRTDAPP60985 99 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 SELENOTP62341 195 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 LY6DQ14210 128 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 EDDM3AQ14507 147 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 Q8IYB0 196 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 RPRMLQ8N4K4 120 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 Q8NA96 180 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 VAMP8Q9BV40 100 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 OBP2BQ9NPH6 170 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 HEYLQ9NQ87 328 aaPredicted RBP11.84□□□□□ -0.51
MSH5-206ENST00000423982 OOEPA6NGQ2 149 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 UTF1Q5T230 341 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 OR8I2Q8N0Y5 310 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 ZBTB34Q8NCN2 500 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 ST6GALNAC3Q8NDV1 305 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 OR5AU1Q8NGC0 362 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 C20orf144Q9BQM9 153 aa11.84□□□□□ -0.51
MSH5-206ENST00000423982 IGHG3P01860 377 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 ZNF718Q3SXZ3 478 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 PRAMEF5Q5TYX0 476 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 C11orf53Q8IXP5 236 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 RAB1CQ92928 201 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 IL36BQ9NZH7 164 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 AHRRA9YTQ3 701 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 ACTL6BO94805 426 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 TBC1D28Q2M2D7 210 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 CNEP1R1Q8N9A8 125 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 RCHY1Q96PM5 261 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 GNB4Q9HAV0 340 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 IGSF10Q6WRI0 2623 aa11.83□□□□□ -0.52
MSH5-206ENST00000423982 LYZL6O75951 148 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 TCL1AP56279 114 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 FXYD3Q14802 87 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 TMEM183BQ1AE95 376 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 RPL39P5Q59GN2 51 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 CFAP46Q8IYW2 2715 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 CXorf1O96002 111 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 CGAP01215 116 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 MYOD1P15172 320 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 GCHFRP30047 84 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 OPRK1P41145 380 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 LGALS4P56470 323 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 DOLPP1Q86YN1 238 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 MMD2Q8IY49 270 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 Q8N976 141 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 DCAF16Q9NXF7 216 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 TNCP24821 2201 aa11.82□□□□□ -0.52
MSH5-206ENST00000423982 PRSS46E5RG02 174 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 PAFAH1B2P68402 229 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 MMDQ15546 238 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 SLC35E4Q6ICL7 350 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 SARAFQ96BY9 339 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 SNRNP40Q96DI7 357 aaKnown RBP11.81□□□□□ -0.52
MSH5-206ENST00000423982 RNASE7Q9H1E1 156 aaKnown RBP11.81□□□□□ -0.52
MSH5-206ENST00000423982 M0QZK8 103 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 IL6RP08887 468 aaPredicted RBP11.81□□□□□ -0.52
MSH5-206ENST00000423982 EFNB3Q15768 340 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 FBXW9Q5XUX1 488 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 OR4P4Q8NGL7 312 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 OR4A16Q8NH70 328 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 EAF1Q96JC9 268 aaPredicted RBP11.81□□□□□ -0.52
MSH5-206ENST00000423982 HES4Q9HCC6 221 aa11.81□□□□□ -0.52
MSH5-206ENST00000423982 INTS1Q8N201 2190 aaKnown RBP11.81□□□□□ -0.52
MSH5-206ENST00000423982 PMCHP20382 165 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 DUTP33316 252 aaKnown RBP11.8□□□□□ -0.52
MSH5-206ENST00000423982 MRPS11P82912 194 aaKnown RBP11.8□□□□□ -0.52
MSH5-206ENST00000423982 C1orf229Q6ZS94 237 aaPredicted RBP11.8□□□□□ -0.52
MSH5-206ENST00000423982 LEAP2Q969E1 77 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 BTF3L4Q96K17 158 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 TBL2Q9Y4P3 447 aaKnown RBP11.8□□□□□ -0.52
MSH5-206ENST00000423982 AGFG2O95081 481 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 VDAC2P45880 294 aaPredicted RBP11.8□□□□□ -0.52
MSH5-206ENST00000423982 Q6ZVH6 145 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 STPG3Q8N7X2 389 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 C9orf106Q8NAJ2 232 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 KLF14Q8TD94 323 aaPredicted RBP11.8□□□□□ -0.52
MSH5-206ENST00000423982 V9GYV3 84 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 M0R1X1 148 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 CRYABP02511 175 aaKnown RBP11.8□□□□□ -0.52
MSH5-206ENST00000423982 SFTPCP11686 197 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 GPR12P47775 334 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 TMEM249Q2WGJ8 235 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 ACP7Q6ZNF0 438 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 MIR17HGQ75NE6 70 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 UHRF2Q96PU4 802 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 HSD17B10Q99714 261 aaKnown RBP11.8□□□□□ -0.52
MSH5-206ENST00000423982 NAT8BQ9UHF3 227 aa11.8□□□□□ -0.52
MSH5-206ENST00000423982 ICE1Q9Y2F5 2266 aa11.79□□□□□ -0.52
MSH5-206ENST00000423982 TRAV34A0A0B4J273 112 aa11.79□□□□□ -0.52
MSH5-206ENST00000423982 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
MSH5-206ENST00000423982 ESDP10768 282 aa11.79□□□□□ -0.52
MSH5-206ENST00000423982 ZNF134P52741 427 aa11.79□□□□□ -0.52
MSH5-206ENST00000423982 RANP62826 216 aaKnown RBP11.79□□□□□ -0.52
MSH5-206ENST00000423982 RPEL1Q2QD12 228 aa11.79□□□□□ -0.52
MSH5-206ENST00000423982 PRR31Q5SQ13 230 aa11.79□□□□□ -0.52
MSH5-206ENST00000423982 MOB3BQ86TA1 216 aa11.79□□□□□ -0.52
MSH5-206ENST00000423982 ATOH7Q8N100 152 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms