RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TMEM17Q86X19 198 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 DMBX1Q8NFW5 382 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 OR51H1Q8NH63 302 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 KLK9Q9UKQ9 250 aa12.09□□□□□ -0.47
COL18A1-205ENST00000423214 PLECQ15149 4684 aaKnown RBP12.09□□□□□ -0.47
COL18A1-205ENST00000423214 TRAV25A0A0B4J276 109 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 IGHV3-35A0A0C4DH35 117 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 IGLC7A0M8Q6 106 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 HPRT1P00492 218 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 PRSS3P35030 304 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 HERV-K104P61576 105 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 ZNF585BQ52M93 769 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 AADACL3Q5VUY0 350 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 THOC7Q6I9Y2 204 aaKnown RBP12.08□□□□□ -0.48
COL18A1-205ENST00000423214 UNQ9165/PRO28630Q6UXU0 137 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 SLC38A6Q8IZM9 456 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 ZNF502Q8TBZ5 544 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 GIMAP1Q8WWP7 306 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 SRSF8Q9BRL6 282 aaKnown RBP12.08□□□□□ -0.48
COL18A1-205ENST00000423214 QTRT1Q9BXR0 403 aaKnown RBP12.08□□□□□ -0.48
COL18A1-205ENST00000423214 TMEM140Q9NV12 185 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 EHFQ9NZC4 300 aa12.08□□□□□ -0.48
COL18A1-205ENST00000423214 MRPL27Q9P0M9 148 aaKnown RBP12.08□□□□□ -0.48
COL18A1-205ENST00000423214 CXorf65A6NEN9 183 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 UPK2O00526 184 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 HPGDSO60760 199 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 S1PR2O95136 353 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 ELLP55199 621 aaPredicted RBP12.07□□□□□ -0.48
COL18A1-205ENST00000423214 ERVK-16P61578 105 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 PMS2P11Q13670 270 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 POU2AF1Q16633 256 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 GPR107Q5VW38 600 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 ZNF818PQ6ZRF7 136 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 CD300LFQ8TDQ1 290 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 BORCS5Q969J3 196 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 OVOL2Q9BRP0 275 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 COMMD9Q9P000 198 aa12.07□□□□□ -0.48
COL18A1-205ENST00000423214 TRAV3A0A0B4J244 114 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 SMIM31A0A1B0GVY4 71 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 TGOLN2O43493 480 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 ELK1P19419 428 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 RORCP51449 518 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 APOC4P55056 127 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 CTF1Q16619 201 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 SNX29P2Q8IUI4 249 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 GDPD1Q8N9F7 314 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 SPAG8Q99932 426 aaPredicted RBP12.06□□□□□ -0.48
COL18A1-205ENST00000423214 ZNF2Q9BSG1 426 aaPredicted RBP12.06□□□□□ -0.48
COL18A1-205ENST00000423214 PLEKHA2Q9HB19 425 aa12.06□□□□□ -0.48
COL18A1-205ENST00000423214 OR2T8A6NH00 312 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 APOA1P02647 267 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 FGF2P09038 288 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 C8orf88P0DMB2 117 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 RPA2P15927 270 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 PTBP1P26599 531 aaKnown RBP eCLIP12.05□□□□□ -0.48
COL18A1-205ENST00000423214 HLA-DMAP28067 261 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 DHRS11Q6UWP2 260 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 HSD17B13Q7Z5P4 300 aaPredicted RBP12.05□□□□□ -0.48
COL18A1-205ENST00000423214 LYSMD2Q8IV50 215 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 OR10W1Q8NGF6 305 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 OR5H2Q8NGV7 314 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 VN1R17PQ8TDU5 208 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 TMEM190Q8WZ59 177 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 ZNF436Q9C0F3 470 aaPredicted RBP12.05□□□□□ -0.48
COL18A1-205ENST00000423214 DAZ1Q9NQZ3 744 aaKnown RBP12.05□□□□□ -0.48
COL18A1-205ENST00000423214 UBQLN2Q9UHD9 624 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 ANAPC10Q9UM13 185 aa12.05□□□□□ -0.48
COL18A1-205ENST00000423214 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 MARCH11A6NNE9 402 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 RLN1P04808 185 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 TRAPPC2P0DI81 140 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 TRAPPC2BP0DI82 140 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 OR13C7P0DN81 318 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 NAT1P18440 290 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 GNRHRP30968 328 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 DEFB135Q30KP9 77 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 SLC25A24Q6NUK1 477 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 GPX8Q8TED1 209 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 LINC00476Q8WZB0 136 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 BSCL2Q96G97 398 aaPredicted RBP12.04□□□□□ -0.48
COL18A1-205ENST00000423214 HINT2Q9BX68 163 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 C5orf66Q9H5L9 145 aa12.04□□□□□ -0.48
COL18A1-205ENST00000423214 A0A0J9YWU9 116 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 FAM25AB3EWG3 89 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 FAM25CB3EWG5 89 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 FAM25GB3EWG6 89 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 GABARAPO95166 117 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 SERPINE2P07093 398 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 BMI1P35226 326 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 HRH1P35367 487 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 TAS2R46P59540 309 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 RNASE12Q5GAN4 147 aaKnown RBP12.03□□□□□ -0.48
COL18A1-205ENST00000423214 LAMTOR1Q6IAA8 161 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 SPSB3Q6PJ21 355 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 UBAC2Q8NBM4 344 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 OR1L8Q8NGR8 309 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 LSM10Q969L4 123 aaKnown RBP12.03□□□□□ -0.48
COL18A1-205ENST00000423214 MOB3AQ96BX8 217 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 CMTM3Q96MX0 182 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms