RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 IDNKQ5T6J7 187 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 Q6ZWC4 215 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 TMEM17Q86X19 198 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 SLC38A6Q8IZM9 456 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 GDPD1Q8N9F7 314 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 DMBX1Q8NFW5 382 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 OR5AP2Q8NGF4 316 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 CD300LFQ8TDQ1 290 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 TMEM190Q8WZ59 177 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
RPS28-201ENST00000417088 UBQLN2Q9UHD9 624 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 TP53TG1Q9Y2A0 90 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 A0A0J9YWU9 116 aa11□□□□□ -0.65
RPS28-201ENST00000417088 TEX50A0A1B0GTY4 177 aa11□□□□□ -0.65
RPS28-201ENST00000417088 CXorf65A6NEN9 183 aa11□□□□□ -0.65
RPS28-201ENST00000417088 OR2T8A6NH00 312 aa11□□□□□ -0.65
RPS28-201ENST00000417088 SERPINE2P07093 398 aa11□□□□□ -0.65
RPS28-201ENST00000417088 TRAPPC2P0DI81 140 aa11□□□□□ -0.65
RPS28-201ENST00000417088 TRAPPC2BP0DI82 140 aa11□□□□□ -0.65
RPS28-201ENST00000417088 GNRHRP30968 328 aa11□□□□□ -0.65
RPS28-201ENST00000417088 MFAP2P55001 183 aa11□□□□□ -0.65
RPS28-201ENST00000417088 TNFRSF9Q07011 255 aa11□□□□□ -0.65
RPS28-201ENST00000417088 PMS2P11Q13670 270 aa11□□□□□ -0.65
RPS28-201ENST00000417088 AADACL3Q5VUY0 350 aa11□□□□□ -0.65
RPS28-201ENST00000417088 THOC7Q6I9Y2 204 aaKnown RBP11□□□□□ -0.65
RPS28-201ENST00000417088 SLC25A24Q6NUK1 477 aa11□□□□□ -0.65
RPS28-201ENST00000417088 DIABLOQ9NR28 239 aa11□□□□□ -0.65
RPS28-201ENST00000417088 COMMD9Q9P000 198 aa11□□□□□ -0.65
RPS28-201ENST00000417088 LOC100506127A0A0U1RQW1 187 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 MEIS3P1A6NDR6 274 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 CYB5BO43169 146 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 SPRY2O43597 315 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 LY6G6CO95867 125 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 BMI1P35226 326 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 CBX5P45973 191 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 APOC4P55056 127 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 DEFB135Q30KP9 77 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 ODF3L2Q3SX64 289 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 HSD17B13Q7Z5P4 300 aaPredicted RBP10.99□□□□□ -0.65
RPS28-201ENST00000417088 LYG2Q86SG7 212 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 OR1L8Q8NGR8 309 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 BSCL2Q96G97 398 aaPredicted RBP10.99□□□□□ -0.65
RPS28-201ENST00000417088 CHRDL1Q9BU40 450 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 YTHDF1Q9BYJ9 559 aaKnown RBP10.99□□□□□ -0.65
RPS28-201ENST00000417088 DAZ1Q9NQZ3 744 aaKnown RBP10.99□□□□□ -0.65
RPS28-201ENST00000417088 NDUFA4L2Q9NRX3 87 aa10.99□□□□□ -0.65
RPS28-201ENST00000417088 IGHV3-21A0A0B4J1V1 117 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 MARCH11A6NNE9 402 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 F8W735 103 aaPredicted RBP10.98□□□□□ -0.65
RPS28-201ENST00000417088 NDUFA4O00483 81 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 UBE2CO00762 179 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 PGLYRP1O75594 196 aaPredicted RBP10.98□□□□□ -0.65
RPS28-201ENST00000417088 HERV-K104P61576 105 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 ERVK-16P61578 105 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 LAMTOR1Q6IAA8 161 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 CEMP1Q6PRD7 247 aaPredicted RBP10.98□□□□□ -0.65
RPS28-201ENST00000417088 DHRS11Q6UWP2 260 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 SCARB1Q8WTV0 552 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 ATP6V0BQ99437 205 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 C21orf62Q9NYP8 219 aa10.98□□□□□ -0.65
RPS28-201ENST00000417088 F11RQ9Y624 299 aaKnown RBP10.98□□□□□ -0.65
RPS28-201ENST00000417088 KIR2DL5BA0A0G2JN68 375 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 KIR2DL5BA0A0G2JPC4 375 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 NUPR2A6NF83 97 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 RLN1P04808 185 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 F2RP25116 425 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 ADMP35318 185 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 SPSB3Q6PJ21 355 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 KIR2DL5AQ8N109 375 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 KIR2DL5BQ8NHK3 375 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 BORCS5Q969J3 196 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 LSM10Q969L4 123 aaKnown RBP10.97□□□□□ -0.65
RPS28-201ENST00000417088 RNF183Q96D59 192 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 C20orf24Q9BUV8 137 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 HINT2Q9BX68 163 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 EHFQ9NZC4 300 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 NSG2Q9Y328 171 aa10.97□□□□□ -0.65
RPS28-201ENST00000417088 IGHV3OR16-8A0A075B7F1 116 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 K7EIM0 57 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 K7EMT4 169 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 XRCC3O43542 346 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 ZNF207O43670 478 aaKnown RBP10.96□□□□□ -0.65
RPS28-201ENST00000417088 KRASP01116 189 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 ATF4P18848 351 aaPredicted RBP10.96□□□□□ -0.65
RPS28-201ENST00000417088 LPAR6P43657 344 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 RFX2P48378 723 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 CADM3Q8N126 398 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 STPG3Q8N7X2 389 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 FCAMRQ8WWV6 532 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 MOB3AQ96BX8 217 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 ZNF414Q96IQ9 312 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 ZNF2Q9BSG1 426 aaPredicted RBP10.96□□□□□ -0.65
RPS28-201ENST00000417088 IFT46Q9NQC8 304 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 ANAPC10Q9UM13 185 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 OR51B2Q9Y5P1 312 aa10.96□□□□□ -0.65
RPS28-201ENST00000417088 KMT2AQ03164 3969 aa10.96□□□□□ -0.66
RPS28-201ENST00000417088 FRAS1Q86XX4 4008 aa10.95□□□□□ -0.66
RPS28-201ENST00000417088 OR4C46A6NHA9 309 aa10.95□□□□□ -0.66
RPS28-201ENST00000417088 TMEM127O75204 238 aa10.95□□□□□ -0.66
RPS28-201ENST00000417088 PMP2P02689 132 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms