RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 CBLN1P23435 193 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 MORN5Q5VZ52 161 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 OR4A47Q6IF82 309 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 MIR17HGQ75NE6 70 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 STPG3Q8N7X2 389 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 CA2P00918 260 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 GATA2P23769 480 aaPredicted RBP8.07□□□□□ -1.12
SS18-203ENST00000415083 GCHFRP30047 84 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 TMEM178AQ8NBL3 297 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 C1orf162Q8NEQ5 155 aaPredicted RBP8.07□□□□□ -1.12
SS18-203ENST00000415083 TRGV8A0A0C4DH27 118 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 E7EUB6 86 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 SPINT2O43291 252 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 IGKV1-16P04430 117 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 SELENOTP62341 195 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 RPL31P62899 125 aaKnown RBP8.07□□□□□ -1.12
SS18-203ENST00000415083 ZNF474Q6S9Z5 364 aaPredicted RBP8.07□□□□□ -1.12
SS18-203ENST00000415083 MOGAT3Q86VF5 341 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 Q8N976 141 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 MS4A10Q96PG2 267 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 OR2V2Q96R30 315 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 CALYQ9NYX4 217 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 V9GYV3 84 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 DYSFO75923 2080 aa8.07□□□□□ -1.12
SS18-203ENST00000415083 MAP1BP46821 2468 aaKnown RBP8.06□□□□□ -1.12
SS18-203ENST00000415083 PLCE1Q9P212 2302 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 IGLV2-8P01709 118 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 CFHR2P36980 270 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 CDKN1AP38936 164 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 IQCJQ1A5X6 159 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 RUSC1-AS1Q66K80 236 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 DEFB123Q8N688 67 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 NEUROG1Q92886 237 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 C11orf52Q96A22 123 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 TBX15Q96SF7 602 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 HEYLQ9NQ87 328 aaPredicted RBP8.06□□□□□ -1.12
SS18-203ENST00000415083 GNG12Q9UBI6 72 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 ZNF292O60281 2723 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 KIR2DL5BA0A0G2JN68 375 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.06□□□□□ -1.12
SS18-203ENST00000415083 KIR2DL5BA0A0G2JPC4 375 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 SSBP2P81877 361 aaPredicted RBP8.06□□□□□ -1.12
SS18-203ENST00000415083 KIR2DL5AQ8N109 375 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 OR4A16Q8NH70 328 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 MGST3O14880 152 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 LGALS4P56470 323 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 BEND2Q8NDZ0 799 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 FAM222BQ8WU58 562 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 ASCL3Q9NQ33 180 aa8.06□□□□□ -1.12
SS18-203ENST00000415083 FOXA2Q9Y261 457 aaPredicted RBP8.06□□□□□ -1.12
SS18-203ENST00000415083 NAV3Q8IVL0 2385 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 PRR33A8MZF0 331 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 F6UZH7 168 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 SPINK4O60575 86 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 MPDU1O75352 247 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 CXorf1O96002 111 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 TOMM20LQ6UXN7 152 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 ITLN1Q8WWA0 313 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 NAGKQ9UJ70 344 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 A0A1W2PPV4 95 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 PSMB11A5LHX3 300 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 ZNF83P51522 516 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 TPTE2P1Q5T6R2 138 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 KCNIP4Q6PIL6 250 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 ST6GALNAC3Q8NDV1 305 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 EAF1Q96JC9 268 aaPredicted RBP8.05□□□□□ -1.12
SS18-203ENST00000415083 SLC45A2Q9UMX9 530 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 PAM16Q9Y3D7 125 aa8.05□□□□□ -1.12
SS18-203ENST00000415083 CGB1A6NKQ9 187 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 GGTLC3B5MD39 225 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 M0R143 59 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 CT45A6P0DMU7 189 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 CT45A5P0DMU8 189 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 CT45A7P0DMV0 189 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 BHLHA15Q7RTS1 189 aaPredicted RBP8.04□□□□□ -1.12
SS18-203ENST00000415083 GAFA1Q96PS6 74 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 NPVFQ9HCQ7 196 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 FAM215AQ9Y5M1 114 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 ASH1LQ9NR48 2969 aaKnown RBP8.04□□□□□ -1.12
SS18-203ENST00000415083 M0R296 226 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 ERVFC1-1P60608 527 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 C21orf62-AS1Q17RA5 79 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 LBHQ53QV2 105 aaPredicted RBP8.04□□□□□ -1.12
SS18-203ENST00000415083 SPRY3O43610 288 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 SERF1AO75920 110 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 ACTL6BO94805 426 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 ESDP10768 282 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 C1orf194Q5T5A4 169 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 STUMQ69YW2 141 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 SLC24A4Q8NFF2 622 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 OR10W1Q8NGF6 305 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 OR4P4Q8NGL7 312 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 FAM216AQ8WUB2 273 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 S1PR3Q99500 378 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 IL36BQ9NZH7 164 aa8.04□□□□□ -1.12
SS18-203ENST00000415083 RP1L1Q8IWN7 2480 aaPredicted RBP8.04□□□□□ -1.12
SS18-203ENST00000415083 PLXNB1O43157 2135 aa8.03□□□□□ -1.12
SS18-203ENST00000415083 TRGV10A0A0A0MS01 117 aa8.03□□□□□ -1.12
SS18-203ENST00000415083 KBTBD11-OT1A0A1B0GTJ5 212 aa8.03□□□□□ -1.12
SS18-203ENST00000415083 FSTL3O95633 263 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms