RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 LINC00312Q9Y6C7 94 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 CCDC168Q8NDH2 2452 aa3.18□□□□□ -1.9
CLK1-203ENST00000409769 CELSR2Q9HCU4 2923 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 HECTD1Q9ULT8 2610 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 TRGV10A0A0A0MS01 117 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 IGKV1D-13A0A0B4J2D9 117 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 KBTBD11-OT1A0A1B0GTJ5 212 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 LINC00854A0A1B0GVQ3 168 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 hADV38S2A0JD32 116 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 OR5H14A6NHG9 310 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 RNF212BA8MTL3 300 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 DISC1C4P0D8 188 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 ITGB1BP1O14713 200 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 MMP23AO75900 390 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 HBZP02008 142 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 RBP4P02753 201 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 TCRBP04435 133 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 CTXN2P0C2S0 81 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 ZNF728P0DKX0 622 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 OR5H8P0DN80 308 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 IGKV1-13P0DP09 117 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 SLC25A16P16260 332 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 CCL3L1P16619 93 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 GZMHP20718 246 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 CD34P28906 385 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 IL2RGP31785 369 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 FAUP35544 74 aaKnown RBP3.17□□□□□ -1.9
CLK1-203ENST00000409769 GLP1RP43220 463 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 INPP1P49441 399 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 CCR6P51684 374 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 RAG2P55895 527 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 EDDM3BP56851 147 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 GNB2P62879 340 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 RPL31P62899 125 aaKnown RBP3.17□□□□□ -1.9
CLK1-203ENST00000409769 CARTPTQ16568 116 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 CLEC12BQ2HXU8 276 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 Q3ZCU0 254 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 LY6G6FQ5SQ64 297 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 CCBE1Q6UXH8 406 aaPredicted RBP3.17□□□□□ -1.9
CLK1-203ENST00000409769 CENPSQ8N2Z9 138 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 ZNF565Q8N9K5 539 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 MINDY2Q8NBR6 621 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 ZNF439Q8NDP4 499 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 LY6G5BQ8NDX9 201 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 OR10A7Q8NGE5 316 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 OR52M1Q8NGK5 317 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 OR56B4Q8NH76 319 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 OR1L1Q8NH94 360 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 TERB2Q8NHR7 220 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 ZNF596Q8TC21 504 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 ARL11Q969Q4 196 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 ZNF714Q96N38 554 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 PRRT1Q99946 306 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 FOXC2Q99958 501 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 SLC25A21Q9BQT8 299 aaPredicted RBP3.17□□□□□ -1.9
CLK1-203ENST00000409769 ZNF2Q9BSG1 426 aaPredicted RBP3.17□□□□□ -1.9
CLK1-203ENST00000409769 MARVELD1Q9BSK0 173 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 PARP12Q9H0J9 701 aaKnown RBP3.17□□□□□ -1.9
CLK1-203ENST00000409769 FXYD6Q9H0Q3 95 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 NARFLQ9H6Q4 476 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 CALYQ9NYX4 217 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 EHFQ9NZC4 300 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 KCNIP1Q9NZI2 227 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 OR1A1Q9P1Q5 309 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 COPZ2Q9P299 210 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 CLN8Q9UBY8 286 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 RPUSD1Q9UJJ7 312 aaKnown RBP3.17□□□□□ -1.9
CLK1-203ENST00000409769 ZNF221Q9UK13 617 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 VSIG4Q9Y279 399 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 FBXO7Q9Y3I1 522 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 PDZD2O15018 2839 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 CENPEQ02224 2701 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 ITPR2Q14571 2701 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 MYO9AB2RTY4 2548 aa3.17□□□□□ -1.9
CLK1-203ENST00000409769 IGHV3-43A0A0B4J1X8 118 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 PPIAL4CA0A0B4J2A2 164 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 IGHV2-70DA0A0C4DH43 119 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 A0A0U1RQK1 487 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 TEX48A0A1B0GUV7 120 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 FAM240BA0A1B0GVZ2 78 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 ZNF320A2RRD8 509 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 CENPXA8MT69 81 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 M0R1W7 72 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 SDCBPO00560 298 aaPredicted RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 YPEL1O60688 119 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 FOXH1O75593 365 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 PPYP01298 95 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 PPIAL4GP0DN37 164 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 IGHV1-8P0DP01 117 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 IGHV3-43DP0DP04 118 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 USF1P22415 310 aaPredicted RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 NFYAP23511 347 aaPredicted RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 OMGP23515 440 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 ZBTB25P24278 435 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 ARPC4P59998 168 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 LOXL1Q08397 574 aaPredicted RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 EIF4EBP1Q13541 118 aaPredicted RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 GNMTQ14749 295 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 SURF2Q15527 256 aaPredicted RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 MSMO1Q15800 293 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms