RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 C11orf40Q8WZ69 217 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 MRGPRFQ96AM1 343 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 MRPL16Q9NX20 251 aaKnown RBP7.15□□□□□ -1.26
NDE1-202ENST00000396355 ALKBH4Q9NXW9 302 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 SETXQ7Z333 2677 aaKnown RBP7.15□□□□□ -1.26
NDE1-202ENST00000396355 LOC101059948A0A1B0GTJ6 334 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 A0A1W2PPC4 97 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 VDAC1P21796 283 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 PRTN3P24158 256 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 ZNF121P58317 390 aaPredicted RBP7.15□□□□□ -1.26
NDE1-202ENST00000396355 RPL27P61353 136 aaKnown RBP7.15□□□□□ -1.26
NDE1-202ENST00000396355 GAGE2BQ13066 116 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 GAGE2EQ4V326 116 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 C16orf52Q8NHV5 167 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 MRPL13Q9BYD1 178 aaKnown RBP7.15□□□□□ -1.26
NDE1-202ENST00000396355 VCX2Q9H322 139 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 GAGE2DQ9UEU5 116 aa7.15□□□□□ -1.26
NDE1-202ENST00000396355 ABCA12Q86UK0 2595 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 MED13Q9UHV7 2174 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 TRBV5-7A0A0A0MS05 114 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 CRYM-AS1A6NIL9 109 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 C10orf142B7Z368 130 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 TOMM40O96008 361 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 IGHV4-34P06331 123 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 ASAH2BP0C7U1 165 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 ZNF141Q15928 474 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 Q1RN00 199 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 CBLN3Q6UW01 205 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 HAPLN4Q86UW8 402 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 OR5AN1Q8NGI8 311 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 OR5A1Q8NGJ0 315 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 RNASE7Q9H1E1 156 aaKnown RBP7.15□□□□□ -1.27
NDE1-202ENST00000396355 PHF3Q92576 2039 aaKnown RBP7.15□□□□□ -1.27
NDE1-202ENST00000396355 FER1L5A0AVI2 2057 aa7.15□□□□□ -1.27
NDE1-202ENST00000396355 ROS1P08922 2347 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 IGHV2-26A0A0B4J1V2 119 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 KIR2DS5A0A0G2JLQ3 304 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 A0A0G2JNG1 304 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 KIR2DS3K7RE56 304 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 OR2J3O76001 311 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 GFERP55789 205 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 OR1D5P58170 312 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 EGR4Q05215 589 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 KIR2DS5Q14953 304 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 LYRM7Q5U5X0 104 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 MBNL2Q5VZF2 373 aaKnown RBP7.14□□□□□ -1.27
NDE1-202ENST00000396355 TRAV5A0A0B4J249 113 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 A0A1W2PS18 150 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 SSTR5P35346 364 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 CATR1Q13166 79 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 SLC35E4Q6ICL7 350 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 BCORP1Q8N888 145 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 SAP30LQ9HAJ7 183 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 SCO2A0A1W2PP80 73 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 TMEM250H0YL14 139 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 ABHD16AO95870 558 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 PRSS57Q6UWY2 283 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 LRTM2Q8N967 370 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 TAF15Q92804 592 aaKnown RBP eCLIP7.14□□□□□ -1.27
NDE1-202ENST00000396355 RCHY1Q96PM5 261 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 SLC7A10Q9NS82 523 aa7.14□□□□□ -1.27
NDE1-202ENST00000396355 CPAMD8Q8IZJ3 1885 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 PPYP01298 95 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 HBZP02008 142 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 IFI6P09912 130 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 ZNF138P52744 262 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 SPATA31B1PQ5VZV4 182 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 OCC1Q8TAD7 63 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 CYYR1Q96J86 154 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 ZNF479Q96JC4 524 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 PNRC2Q9NPJ4 139 aaKnown RBP7.13□□□□□ -1.27
NDE1-202ENST00000396355 CADP27708 2225 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 NOTCH3Q9UM47 2321 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 TRAV8-2A0A0B4J237 113 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 TMEM189A5PLL7 270 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 KLRC4-KLRK1H3BQV0 150 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 K7EMI3 77 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 RER1O15258 196 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 TMEM187Q14656 261 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 ANKRD37Q7Z713 158 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 TPRX1Q8N7U7 411 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 DSCAML1Q8TD84 2053 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 FRYQ5TBA9 3013 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 ARFGEF3Q5TH69 2177 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 A0A0J9YW62 118 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 NKX2-8O15522 239 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 HLA-DQA1P01909 254 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 ZNF883P0CG24 379 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 RPL31P62899 125 aaKnown RBP7.13□□□□□ -1.27
NDE1-202ENST00000396355 IGLV3-21P80748 117 aaPredicted RBP7.13□□□□□ -1.27
NDE1-202ENST00000396355 OR1C1Q15619 314 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 COX19Q49B96 90 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 ASPHD1Q5U4P2 390 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 FNDC7Q5VTL7 733 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 ASCL4Q6XD76 172 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 SPACA3Q8IXA5 215 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 OR2M7Q8NG81 312 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 OR5P3Q8WZ94 311 aa7.13□□□□□ -1.27
NDE1-202ENST00000396355 TRAV36DV7A0A075B6V5 113 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms