RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 TBL2Q9Y4P3 447 aaKnown RBP11.05□□□□□ -0.64
NCDN-201ENST00000356090 PLXNB1O43157 2135 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 MPDU1O75352 247 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 ADH4P08319 380 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 SRIP30626 198 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 MLANAQ16655 118 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 UTF1Q5T230 341 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 ST6GALNAC3Q8NDV1 305 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 STARD4Q96DR4 205 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 PCNX2A6NKB5 2137 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 LOC400499M0QZD8 3231 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 TMPRSS2O15393 492 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 WNT2P09544 360 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 CECR9P0C854 216 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 CD99P14209 185 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 MORN2Q502X0 79 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 EAF1Q96JC9 268 aaPredicted RBP11.05□□□□□ -0.64
NCDN-201ENST00000356090 TMEM208Q9BTX3 173 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 GNB4Q9HAV0 340 aa11.05□□□□□ -0.64
NCDN-201ENST00000356090 ASPMQ8IZT6 3477 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 ARSJQ5FYB0 599 aaPredicted RBP11.04□□□□□ -0.64
NCDN-201ENST00000356090 GMPPAQ96IJ6 420 aaPredicted RBP11.04□□□□□ -0.64
NCDN-201ENST00000356090 PROP1O75360 226 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 P0C879 139 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 CAMPP49913 170 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 ZNF134P52741 427 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 PAFAH1B2P68402 229 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 DMRTA1Q5VZB9 504 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 Q6ZN92 141 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 FAM214BQ7L5A3 538 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 C11orf53Q8IXP5 236 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 TMEM178AQ8NBL3 297 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 OR4S2Q8NH73 311 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 Q8TCH9 128 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 ZPBPQ9BS86 351 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 CLCF1Q9UBD9 225 aa11.04□□□□□ -0.64
NCDN-201ENST00000356090 RIF1Q5UIP0 2472 aaKnown RBP11.04□□□□□ -0.64
NCDN-201ENST00000356090 PLAUP00749 431 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 C1orf210Q8IVY1 113 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 DIRC2Q96SL1 478 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 OPN3Q9H1Y3 402 aaPredicted RBP11.03□□□□□ -0.64
NCDN-201ENST00000356090 ZNRD1Q9P1U0 126 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 TCF21O43680 179 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 MMDQ15546 238 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 SPATA45Q537H7 98 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 C16orf54Q6UWD8 224 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 BORCS7Q96B45 105 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 NABP2Q9BQ15 211 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 PTPRZ1P23471 2315 aaPredicted RBP11.03□□□□□ -0.64
NCDN-201ENST00000356090 M0R1B8 84 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 BRS3P32247 399 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 MRPS11P82912 194 aaKnown RBP11.03□□□□□ -0.64
NCDN-201ENST00000356090 RELBQ01201 579 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 OR4A47Q6IF82 309 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 INO80CQ6PI98 192 aaPredicted RBP11.03□□□□□ -0.64
NCDN-201ENST00000356090 CLEC2AQ6UVW9 174 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 MIEN1Q9BRT3 115 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 ZNF331Q9NQX6 463 aaPredicted RBP11.03□□□□□ -0.64
NCDN-201ENST00000356090 SLC35D1Q9NTN3 355 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 TTC28Q96AY4 2481 aa11.03□□□□□ -0.64
NCDN-201ENST00000356090 J3QR06 171 aa11.02□□□□□ -0.64
NCDN-201ENST00000356090 FBXL7Q9UJT9 491 aa11.02□□□□□ -0.64
NCDN-201ENST00000356090 RAB4AP20338 218 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 REG1BP48304 166 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
NCDN-201ENST00000356090 VWC2Q2TAL6 325 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 LHFPL4Q7Z7J7 247 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 C11orf42Q8N5U0 333 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 Q8N7P7 452 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 OR2V2Q96R30 315 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 CALYQ9NYX4 217 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 AHRRA9YTQ3 701 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 H0Y8G0 127 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 TCTEX1D1Q8N7M0 179 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 RAB1CQ92928 201 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 LINC00479Q96M42 142 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 NRN1Q9NPD7 142 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 TP53TG3Q9ULZ0 132 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 SLC45A2Q9UMX9 530 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 OR51B2Q9Y5P1 312 aa11.02□□□□□ -0.65
NCDN-201ENST00000356090 KIR2DL5BA0A0G2JN68 375 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 KIR2DL5BA0A0G2JPC4 375 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 A0A1W2PNU3 283 aaPredicted RBP11.01□□□□□ -0.65
NCDN-201ENST00000356090 TNFSF13O75888 250 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 SPTA1P02549 2419 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
NCDN-201ENST00000356090 KIR2DL5AQ8N109 375 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 IL19Q9UHD0 177 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 USF1P22415 310 aaPredicted RBP11.01□□□□□ -0.65
NCDN-201ENST00000356090 ACP1P24666 158 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 UBE2L3P68036 154 aaKnown RBP11.01□□□□□ -0.65
NCDN-201ENST00000356090 TPTE2P1Q5T6R2 138 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 RCHY1Q96PM5 261 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 NBASA2RRP1 2371 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 BOD1L1Q8NFC6 3051 aa11.01□□□□□ -0.65
NCDN-201ENST00000356090 IGKV1D-17A0A075B6S4 117 aa11□□□□□ -0.65
NCDN-201ENST00000356090 M0QZK8 103 aa11□□□□□ -0.65
NCDN-201ENST00000356090 DLEU1O43261 78 aa11□□□□□ -0.65
NCDN-201ENST00000356090 HSBP1O75506 76 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms