RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RBP4P02753 201 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 CDX1P47902 265 aaPredicted RBP6.86□□□□□ -1.31
HPS4-201ENST00000336873 UBE2L3P68036 154 aaKnown RBP6.86□□□□□ -1.31
HPS4-201ENST00000336873 RTL8BQ17RB0 113 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 MUC21Q5SSG8 566 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 LEMD1Q68G75 181 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 ST6GALNAC3Q8NDV1 305 aa6.86□□□□□ -1.31
HPS4-201ENST00000336873 TMSB15BA0A087X1C1 80 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 COX7A2P2O60397 106 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 MOSP00540 346 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 IGLV3-1P01715 115 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H1BP16401 226 aaKnown RBP6.85□□□□□ -1.31
HPS4-201ENST00000336873 AMTP48728 403 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 GNG4P50150 75 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 RPL23P62829 140 aaKnown RBP6.85□□□□□ -1.31
HPS4-201ENST00000336873 ZNF726P1Q15940 193 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 TNXAQ16473 311 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 KRTCAP3Q53RY4 240 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 ZNF506Q5JVG8 444 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 UTF1Q5T230 341 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 DBX2Q6ZNG2 339 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 SLC24A4Q8NFF2 622 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 OR4C5Q8NGB2 326 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 OR10G8Q8NGN5 311 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 TMEM45BQ96B21 275 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 SLC35E1Q96K37 410 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 TXN2Q99757 166 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 LINC00470Q9BZP3 86 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 PKIBQ9C010 78 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 SEPSECSQ9HD40 501 aaKnown RBP6.85□□□□□ -1.31
HPS4-201ENST00000336873 HILPDAQ9Y5L2 63 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 A6NNC1 897 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 ZNF891A8MT65 544 aaPredicted RBP6.85□□□□□ -1.31
HPS4-201ENST00000336873 MKRN2OSH3BPM6 223 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 FOXH1O75593 365 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 CA2P00918 260 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 AGAP20933 346 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 ERHP84090 104 aaKnown RBP6.85□□□□□ -1.31
HPS4-201ENST00000336873 AARDQ4LEZ3 155 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 Q6P435 159 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 TEPPQ6URK8 271 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 HAPLN4Q86UW8 402 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 CD177Q8N6Q3 437 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 OR4X1Q8NH49 305 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 OR4S2Q8NH73 311 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 FLYWCH2Q96CP2 140 aaKnown RBP6.85□□□□□ -1.31
HPS4-201ENST00000336873 C2orf88Q9BSF0 95 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 OR51B2Q9Y5P1 312 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 LRRK2Q5S007 2527 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 HIVEP3Q5T1R4 2406 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 UBE2G1P62253 170 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 C11orf42Q8N5U0 333 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 LRTM2Q8N967 370 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 SPSB4Q96A44 273 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 DAZAP1Q96EP5 407 aaKnown RBP6.85□□□□□ -1.31
HPS4-201ENST00000336873 SMDT1Q9H4I9 107 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 SDF2L1Q9HCN8 221 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 RNF7Q9UBF6 113 aa6.85□□□□□ -1.31
HPS4-201ENST00000336873 NACAE9PAV3 2078 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 ZNF253O75346 499 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 CRISP2P16562 243 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 MZT1Q08AG7 82 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
HPS4-201ENST00000336873 OR2D3Q8NGH3 330 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 OR5B3Q8NH48 314 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 RNASE7Q9H1E1 156 aaKnown RBP6.84□□□□□ -1.31
HPS4-201ENST00000336873 IGKV3-7A0A075B6H7 116 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 IGHV3OR16-13A0A075B7E8 117 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 IGHV3-74A0A0B4J1X5 117 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 IGHV1-18A0A0C4DH31 117 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 NCBP2LA6PVI3 153 aaKnown RBP6.84□□□□□ -1.31
HPS4-201ENST00000336873 HSBP1L1C9JCN9 74 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 MGST3O14880 152 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 DLEU1O43261 78 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 OR4A8P0C604 315 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 LYL1P12980 280 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 PNRC1Q12796 327 aaPredicted RBP6.84□□□□□ -1.31
HPS4-201ENST00000336873 C10orf91Q5T1B1 145 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 C19orf35Q6ZS72 473 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 MIR17HGQ75NE6 70 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 STPG3Q8N7X2 389 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 OR2T6Q8NHC8 308 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 LINC01560Q8TB33 94 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 HES4Q9HCC6 221 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 SH2D2AQ9NP31 389 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 ZNF331Q9NQX6 463 aaPredicted RBP6.84□□□□□ -1.31
HPS4-201ENST00000336873 OR6C3Q9NZP0 311 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 ONECUT1Q9UBC0 465 aa6.84□□□□□ -1.31
HPS4-201ENST00000336873 SLC25A10Q9UBX3 287 aaPredicted RBP6.84□□□□□ -1.31
HPS4-201ENST00000336873 TNRC18O15417 2968 aaPredicted RBP6.84□□□□□ -1.31
HPS4-201ENST00000336873 IGKV3D-15A0A087WSY6 115 aa6.84□□□□□ -1.32
HPS4-201ENST00000336873 TRAV5A0A0B4J249 113 aa6.84□□□□□ -1.32
HPS4-201ENST00000336873 DUXBA0A1W2PPF3 345 aa6.84□□□□□ -1.32
HPS4-201ENST00000336873 FAM90A10PA6NDY2 464 aa6.84□□□□□ -1.32
HPS4-201ENST00000336873 FAM90A18PA6NE21 464 aa6.84□□□□□ -1.32
HPS4-201ENST00000336873 FAM90A16PA6NEW6 464 aa6.84□□□□□ -1.32
HPS4-201ENST00000336873 HELTA6NFD8 242 aa6.84□□□□□ -1.32
HPS4-201ENST00000336873 FAM90A20PA6NIJ5 464 aa6.84□□□□□ -1.32
HPS4-201ENST00000336873 NKX6-3A6NJ46 265 aa6.84□□□□□ -1.32
HPS4-201ENST00000336873 FAM90A8PA6NJQ4 464 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms