RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 CCL3L1P16619 93 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 LINC00299Q6ZSB3 139 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 KLHL30-AS1Q8NEE0 82 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 PHLDA1Q8WV24 401 aaPredicted RBP13.62□□□□□ -0.23
CLN5-208ENST00000636183 E9PLN8 166 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 VKORC1Q9BQB6 163 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 MRPL20Q9BYC9 149 aaKnown RBP13.62□□□□□ -0.23
CLN5-208ENST00000636183 WNT2P09544 360 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 WDYHV1Q96HA8 205 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 TDRD15B5MCY1 1934 aaKnown RBP13.62□□□□□ -0.23
CLN5-208ENST00000636183 LCNL1Q6ZST4 164 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 SELENOHQ8IZQ5 122 aaKnown RBP13.62□□□□□ -0.23
CLN5-208ENST00000636183 COX5BP10606 129 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 H3BRM9 83 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 M0QZK8 103 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 TNFRSF9Q07011 255 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 CYP2G1PQ6ZSU1 146 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 NPIPB8E9PQR5 432 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 NPIPB9F8W1W9 429 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 CTDSPLO15194 276 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 NPIPB7O75200 414 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 LOC102723996A0A087X1L8 192 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 GGCTO75223 188 aaKnown RBP13.61□□□□□ -0.23
CLN5-208ENST00000636183 RIPPLY2Q5TAB7 128 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 RAB24Q969Q5 203 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 C18orf15Q96N68 181 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
CLN5-208ENST00000636183 FAM3BP58499 235 aaPredicted RBP13.61□□□□□ -0.23
CLN5-208ENST00000636183 SLIRPQ9GZT3 109 aaKnown RBP13.61□□□□□ -0.23
CLN5-208ENST00000636183 TMEM222Q9H0R3 208 aa13.61□□□□□ -0.23
CLN5-208ENST00000636183 SEPSECSQ9HD40 501 aaKnown RBP13.61□□□□□ -0.23
CLN5-208ENST00000636183 B4DEV8 164 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 C1QL1O75973 258 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 TSPAN13O95857 204 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 NABP2Q9BQ15 211 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 JOSD1Q15040 202 aaPredicted RBP13.6□□□□□ -0.23
CLN5-208ENST00000636183 KIR3DL3Q8N743 410 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 GRIFINA4D1Z8 144 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 Q96MF0 132 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 IGHV3-73A0A0B4J1V6 119 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 FAM74A7A6NL05 159 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 TMEM30BQ3MIR4 351 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 LEMD1Q68G75 181 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 WDFY2Q96P53 400 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 KIAA1217Q5T5P2 1943 aa13.6□□□□□ -0.23
CLN5-208ENST00000636183 ELOA3CA0A087WX78 387 aaPredicted RBP13.59□□□□□ -0.23
CLN5-208ENST00000636183 RRHO14718 337 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 IL6RP08887 468 aaPredicted RBP13.59□□□□□ -0.23
CLN5-208ENST00000636183 LEPP41159 167 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 RNF114Q9Y508 228 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 A0A1B0GV72 72 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 INTS1Q8N201 2190 aaKnown RBP13.59□□□□□ -0.23
CLN5-208ENST00000636183 DOCK5Q9H7D0 1870 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 TRAV14DV4A0A0A6YYC5 116 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 PSMG4Q5JS54 123 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 OR11H4Q8NGC9 324 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 NRIP2Q9BQI9 281 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 CHCHD2Q9Y6H1 151 aaPredicted RBP13.59□□□□□ -0.23
CLN5-208ENST00000636183 KLF4O43474 513 aa13.59□□□□□ -0.23
CLN5-208ENST00000636183 CEACAM8P31997 349 aaPredicted RBP13.59□□□□□ -0.23
CLN5-208ENST00000636183 TAF15Q92804 592 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLN5-208ENST00000636183 TM4SF5O14894 197 aa13.58□□□□□ -0.23
CLN5-208ENST00000636183 HLA-DRB1P01911 266 aa13.58□□□□□ -0.23
CLN5-208ENST00000636183 SCN2AQ99250 2005 aa13.58□□□□□ -0.23
CLN5-208ENST00000636183 MIA3Q5JRA6 1907 aa13.58□□□□□ -0.23
CLN5-208ENST00000636183 A0A0U1RRA0 63 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 RAMP1O60894 148 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 UBE2E2Q96LR5 201 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 G6PC2Q9NQR9 355 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 ZNFX1Q9P2E3 1918 aaKnown RBP13.58□□□□□ -0.24
CLN5-208ENST00000636183 NBR2O15453 112 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 SAPCD1Q5SSQ6 148 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 MYO16Q9Y6X6 1858 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 GFI1BQ5VTD9 330 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 ZNF818PQ6ZRF7 136 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 C7orf66A4D0T2 115 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 LINC00862A6NCI5 91 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 VENTXO95231 258 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 OR10J3Q5JRS4 329 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 TNFSF18Q9UNG2 199 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 TRAV12-3A0A0B4J271 114 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 ADARB2-AS1A8MUL3 147 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 SERF2P84101 59 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 UBE2V2Q15819 145 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 FBLN7Q53RD9 439 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 SAXO1Q8IYX7 474 aa13.58□□□□□ -0.24
CLN5-208ENST00000636183 CLPSP04118 112 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 LRTM2Q8N967 370 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 ADAMTSL1Q8N6G6 1762 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 HMSDA8MTL9 139 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 ATP5LO75964 103 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 BCL2P10415 239 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 ZP1P60852 638 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 RHOGP84095 191 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 H1FOOQ8IZA3 346 aaPredicted RBP13.57□□□□□ -0.24
CLN5-208ENST00000636183 TMEM252Q8N6L7 170 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 AQP3Q92482 292 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 PRADC1Q9BSG0 188 aa13.57□□□□□ -0.24
CLN5-208ENST00000636183 CST9LQ9H4G1 147 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms