RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 KRBOX1C9JBD0 128 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 FAM157AC9JC47 383 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 CA2P00918 260 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 IGKV1D-33P01593 117 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 IGKV1-33P01594 117 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 ARG1P05089 322 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 SNRPCP09234 159 aaKnown RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 SFTA3P0C7M3 94 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 MMP9P14780 707 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 GATA2P23769 480 aaPredicted RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 SPCS3P61009 180 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 HES1Q14469 280 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 GUK1Q16774 197 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 HCP5Q6MZN7 132 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 ACSM6Q6P461 480 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 ZNF833PQ6ZTB9 187 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 RXFP4Q8TDU9 374 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 RPEQ96AT9 228 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 SAT2Q96F10 170 aaPredicted RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 AIFM2Q9BRQ8 373 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 NCOR1P1Q9H4R4 102 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 CHODLQ9H9P2 273 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 PARP11Q9NR21 331 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 MED9Q9NWA0 146 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 GNG13Q9P2W3 67 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 MIOXQ9UGB7 285 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 DOPEY2Q9Y3R5 2298 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 TLN2Q9Y4G6 2542 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 PIGBOS1A0A0B4J2F0 54 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 TEX50A0A1B0GTY4 177 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 TMEM8BA6NDV4 472 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 FAM74A7A6NL05 159 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 C15orf61A6NNL5 157 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 PMS2P5A8MQ11 134 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 FAM90A26D6RGX4 464 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 UPK2O00526 184 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 KBTBD11O94819 623 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 LIPFP07098 398 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 AGAP20933 346 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 SNCAP37840 140 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 HSPE1P61604 102 aaKnown RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 PLGLAQ15195 96 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 LRRC75BQ2VPJ9 315 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 FAM74A3Q4VXF1 159 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 FBLN7Q53RD9 439 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 FFAR4Q5NUL3 377 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 FAM122CQ6P4D5 195 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 PUSL1Q8N0Z8 303 aaKnown RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 TCTEX1D1Q8N7M0 179 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 Q8N7P7 452 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 ZNF709Q8N972 641 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 OR10A7Q8NGE5 316 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 RAB39BQ96DA2 213 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 GNPNAT1Q96EK6 184 aaPredicted RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 PERPQ96FX8 193 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 ADTRPQ96IZ2 230 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 CLEC7AQ9BXN2 247 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 COMMD5Q9GZQ3 224 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 LINC00574Q9H8X3 128 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 PLEKHA3Q9HB20 300 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 ZANQ9Y493 2812 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 NAV2Q8IVL1 2488 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 RAB19A4D1S5 217 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 BUB1B-PAK6H3BSN5 160 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 FCN1O00602 326 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 RBFOX2O43251 390 aaKnown RBP eCLIP2.78□□□□□ -1.96
LIG4-205ENST00000614526 NPY1RP25929 384 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 CD1BP29016 333 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 KIR2DS2P43631 304 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 VDAC2P45880 294 aaPredicted RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 NPBWR1P48145 328 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 PRRX1P54821 245 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 KIAA0141Q14154 515 aaPredicted RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 ZNF726P1Q15940 193 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 TNXAQ16473 311 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 HLA-DRB5Q30154 266 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 MIC13Q5XKP0 118 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 SPSB3Q6PJ21 355 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 DTX2Q86UW9 622 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 RPP25LQ8N5L8 163 aaKnown RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 MAPK1IP1LQ8NDC0 245 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 SLC24A4Q8NFF2 622 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 OR5AN1Q8NGI8 311 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 OR4C13Q8NGP0 309 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 GATAD1Q8WUU5 269 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 NEU4Q8WWR8 484 aaPredicted RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 ST6GALNAC6Q969X2 333 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 TMEM186Q96B77 213 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 CIB3Q96Q77 187 aaPredicted RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 FAM103A1Q9BTL3 118 aaKnown RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 FBXL15Q9H469 300 aa2.78□□□□□ -1.96
LIG4-205ENST00000614526 ZNF430Q9H8G1 570 aaPredicted RBP2.78□□□□□ -1.96
LIG4-205ENST00000614526 PUS1Q9Y606 427 aaKnown RBP eCLIP2.78□□□□□ -1.96
LIG4-205ENST00000614526 FBN2P35556 2912 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 TRBV23-1A0A0A0MS06 115 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 IGHV1-3A0A0C4DH29 117 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 ITGB1BP1O14713 200 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 TIMM23O14925 209 aa2.77□□□□□ -1.97
LIG4-205ENST00000614526 ACTL6BO94805 426 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms