RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 TMEM268Q5VZI3 342 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 SELENOHQ8IZQ5 122 aaKnown RBP11.83□□□□□ -0.52
RAB40B-203ENST00000570676 C12orf45Q8N5I9 185 aaPredicted RBP11.83□□□□□ -0.52
RAB40B-203ENST00000570676 UXS1Q8NBZ7 420 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 KLHL30-AS1Q8NEE0 82 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 LHFPL5Q8TAF8 219 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 OSR1Q8TAX0 266 aaPredicted RBP11.83□□□□□ -0.52
RAB40B-203ENST00000570676 RBPMSQ93062 196 aaKnown RBP11.83□□□□□ -0.52
RAB40B-203ENST00000570676 RITA1Q96K30 269 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 HARBI1Q96MB7 349 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 P2RX4Q99571 388 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 RASL11BQ9BPW5 248 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 OR51J1Q9H342 316 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 COMMD9Q9P000 198 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 ZNF580Q9UK33 172 aa11.83□□□□□ -0.52
RAB40B-203ENST00000570676 A0A0B4J2A0 478 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 NUDT19A8MXV4 375 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 HRASP01112 189 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 KRASP01116 189 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 RPLP1P05386 114 aaKnown RBP11.82□□□□□ -0.52
RAB40B-203ENST00000570676 KRTAP10-11P60412 298 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 TEX38Q6PEX7 206 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 LCNL1Q6ZST4 164 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 RNF152Q8N8N0 203 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 LRTM2Q8N967 370 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 IL22RA2Q969J5 263 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 SHPKQ9UHJ6 478 aa11.82□□□□□ -0.52
RAB40B-203ENST00000570676 PIGBOS1A0A0B4J2F0 54 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 K7EIL1 84 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 SSNA1O43805 119 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 ATG12O94817 140 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 NQO2P16083 231 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 CNTFRP26992 372 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 G6PCP35575 357 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 LGALS7P47929 136 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 AKR1C2P52895 323 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 ERVK-16P61578 105 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 EGFEM1PQ0D2K5 195 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 MMDQ15546 238 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 SSX9Q7RTT3 188 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 LYZL2Q7Z4W2 148 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 VKORC1L1Q8N0U8 176 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 SLC35G3Q8N808 338 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 DMBX1Q8NFW5 382 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 RNASE11Q8TAA1 199 aaKnown RBP11.81□□□□□ -0.52
RAB40B-203ENST00000570676 TSNAXQ99598 290 aaKnown RBP11.81□□□□□ -0.52
RAB40B-203ENST00000570676 RNF5Q99942 180 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 AIFM2Q9BRQ8 373 aa11.81□□□□□ -0.52
RAB40B-203ENST00000570676 MARCH11A6NNE9 402 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
RAB40B-203ENST00000570676 IGKV1-5P01602 117 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 IGHG4P01861 327 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 IGF1P05019 195 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 HOXB5P09067 269 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 HOXD3P31249 432 aaPredicted RBP11.8□□□□□ -0.52
RAB40B-203ENST00000570676 MYCNOSP40205 109 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 FOXE3Q13461 319 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 RRNAD1Q96FB5 475 aaKnown RBP11.8□□□□□ -0.52
RAB40B-203ENST00000570676 RAX2Q96IS3 184 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 SEC22AQ96IW7 307 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 RHOVQ96L33 236 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 DUX3Q96PT4 197 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 GON7Q9BXV9 100 aa11.8□□□□□ -0.52
RAB40B-203ENST00000570676 DUXBA0A1W2PPF3 345 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 SLC25A17O43808 307 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 ADAP1O75689 374 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 NDUFA3O95167 84 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 IGLV2-23P01705 113 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 HLA-DRB1P01911 266 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 ELANEP08246 267 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 SAA1P0DJI8 122 aaPredicted RBP11.79□□□□□ -0.52
RAB40B-203ENST00000570676 PSG5Q15238 335 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 POU2AF1Q16633 256 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 DEFB136Q30KP8 78 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 CXorf66Q5JRM2 361 aaPredicted RBP11.79□□□□□ -0.52
RAB40B-203ENST00000570676 H2BFWTQ7Z2G1 175 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 MYOZ3Q8TDC0 251 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 MED28Q9H204 178 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 TMEM140Q9NV12 185 aa11.79□□□□□ -0.52
RAB40B-203ENST00000570676 hCG_2014768A0A024R1R8 64 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 WI2-2373I1.2A0A1W2PRP0 233 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 DBX1A6NMT0 343 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 RRHO14718 337 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 ATP6V0E1O15342 81 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 NBR2O15453 112 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 SPDEFO95238 335 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 IFNA21P01568 189 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 VDAC1P21796 283 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 PSMB8P28062 276 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 UBE2KP61086 200 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 GGNBP1Q5YKI7 109 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 OR4A47Q6IF82 309 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 NPBQ8NG41 125 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 LSM10Q969L4 123 aaKnown RBP11.78□□□□□ -0.52
RAB40B-203ENST00000570676 GPR61Q9BZJ8 451 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 KIAA1456Q9P272 454 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 METTL1Q9UBP6 276 aaKnown RBP11.78□□□□□ -0.52
RAB40B-203ENST00000570676 TMED3Q9Y3Q3 217 aa11.78□□□□□ -0.52
RAB40B-203ENST00000570676 IGHV7-81A0A0B4J1V7 117 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms