RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 TMED3Q9Y3Q3 217 aa9.83□□□□□ -0.84
SMG1-213ENST00000567737 NBDYA0A0U1RRE5 68 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 LINC00473A8K010 186 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 C15orf62A8K5M9 175 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 TRDCB7Z8K6 153 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 CHEK1O14757 476 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 FCGR3BO75015 233 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 KBTBD11O94819 623 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 ARFRP1Q13795 201 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 YIF1BQ5BJH7 314 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 OR10K2Q6IF99 312 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 VKORC1L1Q8N0U8 176 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 TMEM116Q8NCL8 245 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 GGHQ92820 318 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 C12orf4Q9NQ89 552 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 ARGLU1Q9NWB6 273 aaPredicted RBP9.82□□□□□ -0.84
SMG1-213ENST00000567737 PRR13Q9NZ81 148 aa9.82□□□□□ -0.84
SMG1-213ENST00000567737 IGHV7-4-1A0A0J9YVY3 117 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 BET1O15155 118 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 CD3GP09693 182 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 C4BPBP20851 252 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 KRTAP10-2P60368 255 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 PLA2G7Q13093 441 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 C21orf62-AS1Q17RA5 79 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 SPSB3Q6PJ21 355 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 OR4A4PQ8NGN8 299 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 OR10J5Q8NHC4 309 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 TMEM167AQ8TBQ9 72 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 VN1R17PQ8TDU5 208 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 GIMAP1Q8WWP7 306 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 TM2D1Q9BX74 207 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 CLEC5AQ9NY25 188 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 MRPS7Q9Y2R9 242 aaKnown RBP9.81□□□□□ -0.84
SMG1-213ENST00000567737 ARL2BPQ9Y2Y0 163 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 NACAE9PAV3 2078 aa9.81□□□□□ -0.84
SMG1-213ENST00000567737 AGRNO00468 2067 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 TRBV5-7A0A0A0MS05 114 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 DNASE2O00115 360 aaPredicted RBP9.8□□□□□ -0.84
SMG1-213ENST00000567737 OGG1O15527 345 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 CALB2P22676 271 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 CRHBPP24387 322 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 TMPRSS11AQ6ZMR5 421 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 TRPT1Q86TN4 253 aaKnown RBP9.8□□□□□ -0.84
SMG1-213ENST00000567737 OR52I1Q8NGK6 324 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 SLC29A1Q99808 456 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 ATG101Q9BSB4 218 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 YTHDF1Q9BYJ9 559 aaKnown RBP9.8□□□□□ -0.84
SMG1-213ENST00000567737 AMBNQ9NP70 447 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 PRELID3BQ9Y3B1 194 aa9.8□□□□□ -0.84
SMG1-213ENST00000567737 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
SMG1-213ENST00000567737 IGHV3-49A0A0A0MS15 119 aa9.79□□□□□ -0.84
SMG1-213ENST00000567737 CYB5BO43169 146 aa9.79□□□□□ -0.84
SMG1-213ENST00000567737 LIMS3P0CW19 117 aa9.79□□□□□ -0.84
SMG1-213ENST00000567737 LIMS4P0CW20 117 aa9.79□□□□□ -0.84
SMG1-213ENST00000567737 SPART-AS1P0CW21 52 aa9.79□□□□□ -0.84
SMG1-213ENST00000567737 RPS11P62280 158 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG1-213ENST00000567737 FAM90A2PQ658T7 463 aa9.79□□□□□ -0.84
SMG1-213ENST00000567737 ZNF66Q6ZN08 573 aa9.79□□□□□ -0.84
SMG1-213ENST00000567737 CMSS1Q9BQ75 279 aaKnown RBP9.79□□□□□ -0.84
SMG1-213ENST00000567737 FLG2Q5D862 2391 aaPredicted RBP9.78□□□□□ -0.84
SMG1-213ENST00000567737 RAB27BO00194 218 aa9.78□□□□□ -0.84
SMG1-213ENST00000567737 FABP7O15540 132 aa9.78□□□□□ -0.84
SMG1-213ENST00000567737 CD5P06127 495 aa9.78□□□□□ -0.84
SMG1-213ENST00000567737 OR2B11Q5JQS5 317 aa9.78□□□□□ -0.84
SMG1-213ENST00000567737 KCTD9Q7L273 389 aa9.78□□□□□ -0.84
SMG1-213ENST00000567737 TCF24Q7RTU0 167 aa9.78□□□□□ -0.84
SMG1-213ENST00000567737 AMIGO2Q86SJ2 522 aa9.78□□□□□ -0.84
SMG1-213ENST00000567737 PUSL1Q8N0Z8 303 aaKnown RBP9.78□□□□□ -0.84
SMG1-213ENST00000567737 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
SMG1-213ENST00000567737 Q96MT0 163 aa9.78□□□□□ -0.84
SMG1-213ENST00000567737 A0A0A6YYD4 124 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 SOCS1O15524 211 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 EIF4EP06730 217 aaKnown RBP9.77□□□□□ -0.85
SMG1-213ENST00000567737 HTN3P15516 51 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 CELP19835 753 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 RPL8P62917 257 aaKnown RBP9.77□□□□□ -0.85
SMG1-213ENST00000567737 UNC119Q13432 240 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 IGSF11Q5DX21 431 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 TTC23Q5W5X9 447 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 UBAC2Q8NBM4 344 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 SYT8Q8NBV8 401 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 ATP6V0BQ99437 205 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 GINS4Q9BRT9 223 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 CABLES2Q9BTV7 478 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 MS4A6AQ9H2W1 248 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 BABAM2Q9NXR7 383 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 C21orf62Q9NYP8 219 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 PTTG2Q9NZH5 202 aa9.77□□□□□ -0.85
SMG1-213ENST00000567737 IGHV3OR16-13A0A075B7E8 117 aa9.76□□□□□ -0.85
SMG1-213ENST00000567737 TRBV6-7A0A0A0MS04 114 aa9.76□□□□□ -0.85
SMG1-213ENST00000567737 TRAV14DV4A0A0A6YYC5 116 aa9.76□□□□□ -0.85
SMG1-213ENST00000567737 IGHV3-74A0A0B4J1X5 117 aa9.76□□□□□ -0.85
SMG1-213ENST00000567737 HLA-GP17693 338 aa9.76□□□□□ -0.85
SMG1-213ENST00000567737 MRPS15P82914 257 aaKnown RBP9.76□□□□□ -0.85
SMG1-213ENST00000567737 RELQ04864 619 aaPredicted RBP9.76□□□□□ -0.85
SMG1-213ENST00000567737 Q8N3U1 123 aa9.76□□□□□ -0.85
SMG1-213ENST00000567737 FAM24BQ8N5W8 94 aa9.76□□□□□ -0.85
SMG1-213ENST00000567737 OR4S2Q8NH73 311 aa9.76□□□□□ -0.85
SMG1-213ENST00000567737 DERL3Q96Q80 235 aa9.76□□□□□ -0.85
SMG1-213ENST00000567737 URM1Q9BTM9 101 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms