RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CYGBQ8WWM9 190 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 MAFIPQ8WZ33 124 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 AQP3Q92482 292 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 RGP1Q92546 391 aaPredicted RBP0.79□□□□□ -2.28
SMG1-212ENST00000566328 ITFG2Q969R8 447 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 TMEM203Q969S6 136 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 SPTSSAQ969W0 71 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 UPRTQ96BW1 309 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 PELI1Q96FA3 418 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 COQ2Q96H96 371 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 PLEKHA8Q96JA3 519 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 C4orf36Q96KX1 117 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 OR5B12Q96R08 314 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 OR8B4Q96RC9 309 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 OR8B2Q96RD0 313 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 CLCC1Q96S66 551 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 GPX7Q96SL4 187 aaPredicted RBP0.79□□□□□ -2.28
SMG1-212ENST00000566328 CITED1Q99966 193 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 MICU1Q9BPX6 476 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 SIKE1Q9BRV8 207 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 ZNF649Q9BS31 505 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 NDFIP1Q9BT67 221 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 SUCNR1Q9BXA5 334 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 OSBPL10Q9BXB5 764 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 MROQ9BYG7 248 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 PARP12Q9H0J9 701 aaKnown RBP0.79□□□□□ -2.28
SMG1-212ENST00000566328 HDHD2Q9H0R4 259 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 ALX4Q9H161 411 aaPredicted RBP0.79□□□□□ -2.28
SMG1-212ENST00000566328 C1orf21Q9H246 121 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 BANF2Q9H503 90 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 FN3KRPQ9HA64 309 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 BEX1Q9HBH7 125 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 ZNF286AQ9HBT8 521 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 MYOZ1Q9NP98 299 aaPredicted RBP0.79□□□□□ -2.28
SMG1-212ENST00000566328 MED4Q9NPJ6 270 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 CMC2Q9NRP2 79 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 TAS2R4Q9NYW5 299 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 ACTR3BQ9P1U1 418 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 STX18Q9P2W9 335 aaKnown RBP0.79□□□□□ -2.28
SMG1-212ENST00000566328 OR5V1Q9UGF6 321 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 GNG8Q9UK08 70 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 ZNF222Q9UK12 451 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 SLC7A11Q9UPY5 501 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 GSTK1Q9Y2Q3 226 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 EXOSC1Q9Y3B2 195 aaKnown RBP0.79□□□□□ -2.28
SMG1-212ENST00000566328 SNX5Q9Y5X3 404 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 R4GMQ9 66 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 HSPG2P98160 4391 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 LRP1BQ9NZR2 4599 aa0.79□□□□□ -2.28
SMG1-212ENST00000566328 HERC2O95714 4834 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 DNAH8Q96JB1 4490 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 HERC1Q15751 4861 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 A0A075B6Q4 140 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 IGKV1D-8A0A087WSZ0 117 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 MEIKINA0A087WXM9 373 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 IGHV2-26A0A0B4J1V2 119 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TRBV2A0A0J9YWF9 115 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 A0A1B0GVI7 797 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 LOC107986453A0A1B0GWG9 222 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ODAMA1E959 279 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ERICH4A6NGS2 130 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 NCBP2LA6PVI3 153 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 C17orf98A8MV24 154 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZNF878C9JN71 531 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZNF670-ZNF695F2Z2N8 137 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 LOC110117498-PIK3R3F6TDL0 507 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 BUB1B-PAK6H3BSN5 160 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 CLDN34H7C241 214 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 J3QLI3 93 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 DYNC1I1O14576 645 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TOR1AO14656 332 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PHYHO14832 338 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 GEMIN2O14893 280 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 SOCS1O15524 211 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ENSAO43768 121 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 NOS1APO75052 506 aaPredicted RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 DCTN3O75935 186 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 CLPXO76031 633 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 HAND1O96004 215 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PAHP00439 452 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 IFNGP01579 166 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 IGLV3-1P01715 115 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 IGHV3-11P01762 117 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 HLA-AP01891 365 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 PRH1P02810 166 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 MT-ND4P03905 459 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OPN1MWP04001 364 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 KRT8P05787 483 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 RPSAP08865 295 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 GIPP09681 153 aaPredicted RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 LIMS3P0CW19 117 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 LIMS4P0CW20 117 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PGA5P0DJD9 388 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZNF728P0DKX0 622 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OPN1MW2P0DN77 364 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OPN1MW3P0DN78 364 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 CGB3P0DN86 165 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 CGB7P0DN87 165 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 IGHV1-8P0DP01 117 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PRB4P10163 310 aaPredicted RBP0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms