RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 URGCP-MRPS24S4R325 110 aa2.56□□□□□ -2
MARK3-220ENST00000560417 COL12A1Q99715 3063 aa2.56□□□□□ -2
MARK3-220ENST00000560417 SPTBP11277 2137 aa2.56□□□□□ -2
MARK3-220ENST00000560417 URB1O60287 2271 aaKnown RBP2.56□□□□□ -2
MARK3-220ENST00000560417 ZNF462Q96JM2 2506 aa2.56□□□□□ -2
MARK3-220ENST00000560417 TLN1Q9Y490 2541 aaKnown RBP2.56□□□□□ -2
MARK3-220ENST00000560417 IGLV10-54A0A075B6I4 117 aa2.55□□□□□ -2
MARK3-220ENST00000560417 TRBV24-1A0A075B6N3 115 aa2.55□□□□□ -2
MARK3-220ENST00000560417 A6NED7 52 aa2.55□□□□□ -2
MARK3-220ENST00000560417 PGRMC1O00264 195 aaKnown RBP2.55□□□□□ -2
MARK3-220ENST00000560417 SYNGR2O43760 224 aa2.55□□□□□ -2
MARK3-220ENST00000560417 SCN2BO60939 215 aa2.55□□□□□ -2
MARK3-220ENST00000560417 NIPSNAP2O75323 286 aa2.55□□□□□ -2
MARK3-220ENST00000560417 UTP20O75691 2785 aaKnown RBP2.55□□□□□ -2
MARK3-220ENST00000560417 CDK14O94921 469 aa2.55□□□□□ -2
MARK3-220ENST00000560417 TNFSF15O95150 251 aa2.55□□□□□ -2
MARK3-220ENST00000560417 STATHP02808 62 aa2.55□□□□□ -2
MARK3-220ENST00000560417 OPN1SWP03999 348 aa2.55□□□□□ -2
MARK3-220ENST00000560417 PSKH1P11801 424 aa2.55□□□□□ -2
MARK3-220ENST00000560417 AKR1C4P17516 323 aa2.55□□□□□ -2
MARK3-220ENST00000560417 MSNP26038 577 aaKnown RBP2.55□□□□□ -2
MARK3-220ENST00000560417 PEBP1P30086 187 aaKnown RBP2.55□□□□□ -2
MARK3-220ENST00000560417 CCR7P32248 378 aa2.55□□□□□ -2
MARK3-220ENST00000560417 COILP38432 576 aaPredicted RBP2.55□□□□□ -2
MARK3-220ENST00000560417 HSPA13P48723 471 aa2.55□□□□□ -2
MARK3-220ENST00000560417 TNFRSF9Q07011 255 aa2.55□□□□□ -2
MARK3-220ENST00000560417 TAF1AQ15573 450 aaPredicted RBP2.55□□□□□ -2
MARK3-220ENST00000560417 DEFB110Q30KQ9 67 aa2.55□□□□□ -2
MARK3-220ENST00000560417 CLEC6AQ6EIG7 209 aa2.55□□□□□ -2
MARK3-220ENST00000560417 SMARCD3Q6STE5 483 aa2.55□□□□□ -2
MARK3-220ENST00000560417 C2orf73Q8N5S3 287 aaPredicted RBP2.55□□□□□ -2
MARK3-220ENST00000560417 DNAAF3Q8N9W5 541 aa2.55□□□□□ -2
MARK3-220ENST00000560417 RNASEH2CQ8TDP1 164 aaKnown RBP2.55□□□□□ -2
MARK3-220ENST00000560417 MAGOHBQ96A72 148 aaKnown RBP2.55□□□□□ -2
MARK3-220ENST00000560417 LINC00588Q9Y4M8 146 aa2.55□□□□□ -2
MARK3-220ENST00000560417 FLNCQ14315 2725 aa2.54□□□□□ -2
MARK3-220ENST00000560417 HELZ2Q9BYK8 2649 aaKnown RBP2.54□□□□□ -2
MARK3-220ENST00000560417 IGHV3OR15-7A0A075B7D8 119 aa2.54□□□□□ -2
MARK3-220ENST00000560417 GPR171O14626 319 aa2.54□□□□□ -2
MARK3-220ENST00000560417 UGT2B11O75310 529 aa2.54□□□□□ -2
MARK3-220ENST00000560417 CBR3O75828 277 aa2.54□□□□□ -2
MARK3-220ENST00000560417 LTAP01374 205 aa2.54□□□□□ -2
MARK3-220ENST00000560417 F8A1P23610 371 aa2.54□□□□□ -2
MARK3-220ENST00000560417 CRABP2P29373 138 aa2.54□□□□□ -2
MARK3-220ENST00000560417 KDELR2P33947 212 aa2.54□□□□□ -2
MARK3-220ENST00000560417 CAPZBP47756 277 aa2.54□□□□□ -2
MARK3-220ENST00000560417 MP68P56378 58 aa2.54□□□□□ -2
MARK3-220ENST00000560417 RAB2AP61019 212 aa2.54□□□□□ -2
MARK3-220ENST00000560417 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
MARK3-220ENST00000560417 ACSBG2Q5FVE4 666 aa2.54□□□□□ -2
MARK3-220ENST00000560417 NIT1Q86X76 327 aa2.54□□□□□ -2
MARK3-220ENST00000560417 TRABDQ9H4I3 376 aa2.54□□□□□ -2
MARK3-220ENST00000560417 NAGKQ9UJ70 344 aa2.54□□□□□ -2
MARK3-220ENST00000560417 RPUSD1Q9UJJ7 312 aaKnown RBP2.54□□□□□ -2
MARK3-220ENST00000560417 MCTS1Q9ULC4 181 aaKnown RBP2.54□□□□□ -2
MARK3-220ENST00000560417 TNRC6AQ8NDV7 1962 aaKnown RBP2.54□□□□□ -2
MARK3-220ENST00000560417 PRRC2CQ9Y520 2896 aaKnown RBP2.54□□□□□ -2
MARK3-220ENST00000560417 FASNP49327 2511 aaKnown RBP2.53□□□□□ -2
MARK3-220ENST00000560417 CCDC88CQ9P219 2028 aa2.53□□□□□ -2
MARK3-220ENST00000560417 BAHCC1Q9P281 2608 aa2.53□□□□□ -2
MARK3-220ENST00000560417 LINC00854A0A1B0GVQ3 168 aa2.53□□□□□ -2
MARK3-220ENST00000560417 A0A1W2PNM2 257 aa2.53□□□□□ -2
MARK3-220ENST00000560417 PHYHO14832 338 aa2.53□□□□□ -2
MARK3-220ENST00000560417 LECT2O14960 151 aa2.53□□□□□ -2
MARK3-220ENST00000560417 PSCAO43653 123 aa2.53□□□□□ -2
MARK3-220ENST00000560417 SYNGR1O43759 233 aa2.53□□□□□ -2
MARK3-220ENST00000560417 NDUFS6O75380 124 aaKnown RBP2.53□□□□□ -2
MARK3-220ENST00000560417 C1QAP02745 245 aa2.53□□□□□ -2
MARK3-220ENST00000560417 UGT2B7P16662 529 aa2.53□□□□□ -2
MARK3-220ENST00000560417 DR1Q01658 176 aa2.53□□□□□ -2
MARK3-220ENST00000560417 C10orf91Q5T1B1 145 aa2.53□□□□□ -2
MARK3-220ENST00000560417 PDPK2PQ6A1A2 396 aa2.53□□□□□ -2
MARK3-220ENST00000560417 LRP11Q86VZ4 500 aa2.53□□□□□ -2
MARK3-220ENST00000560417 OTUD6BQ8N6M0 293 aa2.53□□□□□ -2
MARK3-220ENST00000560417 OR11G2Q8NGC1 345 aa2.53□□□□□ -2
MARK3-220ENST00000560417 OR4E2Q8NGC2 313 aa2.53□□□□□ -2
MARK3-220ENST00000560417 DYNC2LI1Q8TCX1 351 aa2.53□□□□□ -2
MARK3-220ENST00000560417 OR5P3Q8WZ94 311 aa2.53□□□□□ -2
MARK3-220ENST00000560417 RAD51AP1Q96B01 352 aa2.53□□□□□ -2
MARK3-220ENST00000560417 DCUN1D1Q96GG9 259 aa2.53□□□□□ -2
MARK3-220ENST00000560417 ATP6V1G3Q96LB4 118 aa2.53□□□□□ -2
MARK3-220ENST00000560417 TMEM56Q96MV1 263 aa2.53□□□□□ -2
MARK3-220ENST00000560417 KIFC1Q9BW19 673 aa2.53□□□□□ -2
MARK3-220ENST00000560417 SPACA1Q9HBV2 294 aa2.53□□□□□ -2
MARK3-220ENST00000560417 PHLDA3Q9Y5J5 127 aa2.53□□□□□ -2
MARK3-220ENST00000560417 CSMD2Q7Z408 3487 aa2.53□□□□□ -2
MARK3-220ENST00000560417 SETXQ7Z333 2677 aaKnown RBP2.53□□□□□ -2.01
MARK3-220ENST00000560417 HIVEP2P31629 2446 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 UBR5O95071 2799 aaPredicted RBP2.52□□□□□ -2.01
MARK3-220ENST00000560417 EFCAB9A8MZ26 197 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 J3QLI3 93 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 MPZL2O60487 215 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 SH2D1AO60880 128 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 ATF1P18846 271 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 CASQ1P31415 396 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 GABRA4P48169 554 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 FAM3AP98173 230 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 SKP2Q13309 424 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 PMS2P3Q13401 168 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 MTERF4Q7Z6M4 381 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 1245.5 ms