RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ZNF585BQ52M93 769 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 DEFB121Q5J5C9 76 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 ACSM6Q6P461 480 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 FCAMRQ8WWV6 532 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 AIFM2Q9BRQ8 373 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 RSRP1Q9BUV0 290 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 SLC2A9Q9NRM0 540 aa15.73■□□□□ 0.11
VTI1B-205ENST00000555543 ZMAT5Q9UDW3 170 aaKnown RBP15.73■□□□□ 0.11
VTI1B-205ENST00000555543 FAM223BA6NKX1 122 aa15.72■□□□□ 0.11
VTI1B-205ENST00000555543 NPIPB5A8MRT5 1133 aa15.72■□□□□ 0.11
VTI1B-205ENST00000555543 LPAR6P43657 344 aa15.72■□□□□ 0.11
VTI1B-205ENST00000555543 EXOSC2Q13868 293 aaKnown RBP15.72■□□□□ 0.11
VTI1B-205ENST00000555543 ZNF429Q86V71 674 aa15.72■□□□□ 0.11
VTI1B-205ENST00000555543 FAM223AQ8IWN6 122 aa15.72■□□□□ 0.11
VTI1B-205ENST00000555543 DMBX1Q8NFW5 382 aa15.72■□□□□ 0.11
VTI1B-205ENST00000555543 PEF1Q9UBV8 284 aaKnown RBP15.72■□□□□ 0.11
VTI1B-205ENST00000555543 ZNF257Q9Y2Q1 563 aa15.72■□□□□ 0.11
VTI1B-205ENST00000555543 MARCH11A6NNE9 402 aa15.71■□□□□ 0.11
VTI1B-205ENST00000555543 OR2J3O76001 311 aa15.71■□□□□ 0.11
VTI1B-205ENST00000555543 ZP3P21754 424 aa15.71■□□□□ 0.11
VTI1B-205ENST00000555543 UCP3P55916 312 aa15.71■□□□□ 0.11
VTI1B-205ENST00000555543 OR2B8PP59922 312 aa15.71■□□□□ 0.11
VTI1B-205ENST00000555543 RNASE10Q5GAN6 216 aaKnown RBP15.71■□□□□ 0.11
VTI1B-205ENST00000555543 SLC25A42Q86VD7 318 aa15.71■□□□□ 0.11
VTI1B-205ENST00000555543 OR4D10Q8NGI6 311 aa15.71■□□□□ 0.11
VTI1B-205ENST00000555543 REG1AP05451 166 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 CRYGCP07315 174 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 PSMB6P28072 239 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 ATP5G2Q06055 141 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 KLF5Q13887 457 aaPredicted RBP15.7■□□□□ 0.1
VTI1B-205ENST00000555543 LPCAT3Q6P1A2 487 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 TBC1D26Q86UD7 250 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 HAPLN4Q86UW8 402 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 LHFPL1Q86WI0 220 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 SLC38A6Q8IZM9 456 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 NECAP1Q8NC96 275 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 FANCD2OSQ96PS1 177 aa15.7■□□□□ 0.1
VTI1B-205ENST00000555543 SLIRPQ9GZT3 109 aaKnown RBP15.7■□□□□ 0.1
VTI1B-205ENST00000555543 ZNF256Q9Y2P7 627 aaPredicted RBP15.7■□□□□ 0.1
VTI1B-205ENST00000555543 IGLC7A0M8Q6 106 aa15.69■□□□□ 0.1
VTI1B-205ENST00000555543 GABARAPH6UMI1 98 aa15.69■□□□□ 0.1
VTI1B-205ENST00000555543 KRASP01116 189 aa15.69■□□□□ 0.1
VTI1B-205ENST00000555543 CTRB1P17538 263 aa15.69■□□□□ 0.1
VTI1B-205ENST00000555543 G6PCP35575 357 aa15.69■□□□□ 0.1
VTI1B-205ENST00000555543 ERVK-16P61578 105 aa15.69■□□□□ 0.1
VTI1B-205ENST00000555543 C15orf32Q32M92 178 aa15.69■□□□□ 0.1
VTI1B-205ENST00000555543 CTRB2Q6GPI1 263 aa15.69■□□□□ 0.1
VTI1B-205ENST00000555543 C15orf40Q8WUR7 153 aa15.69■□□□□ 0.1
VTI1B-205ENST00000555543 BMPR1BO00238 502 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 CD74P04233 296 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 IFNA6P05013 189 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 FGF2P09038 288 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 TBPP20226 339 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 SYNJ2BPP57105 145 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 ARRDC1Q8N5I2 433 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 TMEM229BQ8NBD8 167 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 DIRAS2Q96HU8 199 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 COMMD5Q9GZQ3 224 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 C6orf62Q9GZU0 229 aaPredicted RBP15.68■□□□□ 0.1
VTI1B-205ENST00000555543 FBXL7Q9UJT9 491 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 NSG2Q9Y328 171 aa15.68■□□□□ 0.1
VTI1B-205ENST00000555543 LSM4Q9Y4Z0 139 aaKnown RBP15.68■□□□□ 0.1
VTI1B-205ENST00000555543 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.67■□□□□ 0.1
VTI1B-205ENST00000555543 NDUFB8O95169 186 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 LY86O95711 162 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 IGKV1-39P01597 117 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 IGKV1D-39P04432 117 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 SPNP16150 400 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 PI3P19957 117 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 PPP5CP53041 499 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 KLK9Q2XQG4 91 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 IL34Q6ZMJ4 242 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 OR10W1Q8NGF6 305 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 SMIM4Q8WVI0 70 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 QTRT1Q9BXR0 403 aaKnown RBP15.67■□□□□ 0.1
VTI1B-205ENST00000555543 PTTG2Q9NZH5 202 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 KLK9Q9UKQ9 250 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 S4R3C0 116 aa15.67■□□□□ 0.1
VTI1B-205ENST00000555543 PGAM2P15259 253 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 S100GP29377 79 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 TAS2R19P59542 299 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 MRPS10P82664 201 aaKnown RBP15.66■□□□□ 0.1
VTI1B-205ENST00000555543 RPEL1Q2QD12 228 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 FAAP20Q6NZ36 180 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 OR9G4Q8NGQ1 327 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 OR4C12Q96R67 309 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 ELOVL1Q9BW60 279 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 FAM212BQ9NTI7 297 aaPredicted RBP15.66■□□□□ 0.1
VTI1B-205ENST00000555543 DMRT1Q9Y5R6 373 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 SORL1Q92673 2214 aa15.66■□□□□ 0.1
VTI1B-205ENST00000555543 IGLV11-55A0A075B6I3 123 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 TEX50A0A1B0GTY4 177 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 DBX1A6NMT0 343 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 RAB3DO95716 219 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 IGHV3-23P01764 117 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 RND3P61587 244 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 IL18Q14116 193 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 STEAP1BQ6NZ63 245 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 CADM3Q8N126 398 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 MRGPRFQ96AM1 343 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms