RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 IL6RP08887 468 aaPredicted RBP18.03■□□□□ 0.48
NEK9-203ENST00000553945 LGALS1P09382 135 aaKnown RBP18.03■□□□□ 0.48
NEK9-203ENST00000553945 G6PCP35575 357 aa18.03■□□□□ 0.48
NEK9-203ENST00000553945 BEAN1Q3B7T3 259 aa18.03■□□□□ 0.48
NEK9-203ENST00000553945 FOXB2Q5VYV0 432 aa18.03■□□□□ 0.48
NEK9-203ENST00000553945 DPF1Q92782 380 aa18.03■□□□□ 0.48
NEK9-203ENST00000553945 MRGPRFQ96AM1 343 aa18.03■□□□□ 0.48
NEK9-203ENST00000553945 FAM212BQ9NTI7 297 aaPredicted RBP18.03■□□□□ 0.48
NEK9-203ENST00000553945 C13orf42A0A1B0GVH6 325 aa18.02■□□□□ 0.48
NEK9-203ENST00000553945 ZNF616Q08AN1 781 aa18.02■□□□□ 0.48
NEK9-203ENST00000553945 FHL3Q13643 280 aa18.02■□□□□ 0.48
NEK9-203ENST00000553945 ZNF79Q15937 498 aa18.02■□□□□ 0.48
NEK9-203ENST00000553945 SPANXN2Q5MJ10 180 aa18.02■□□□□ 0.48
NEK9-203ENST00000553945 Q8N402 240 aa18.02■□□□□ 0.48
NEK9-203ENST00000553945 OR51S1Q8NGJ8 323 aa18.02■□□□□ 0.48
NEK9-203ENST00000553945 COPZ2Q9P299 210 aa18.02■□□□□ 0.48
NEK9-203ENST00000553945 A0A0G2JLM5 398 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 A0A1B0GW64 132 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 BRI3O95415 125 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 PRH1P02810 166 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 ECI1P42126 302 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 DEFA5Q01523 94 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 SLC25A42Q86VD7 318 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 TTC9CQ8N5M4 171 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 CCDC71LQ8N9Z2 235 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 OR6Q1Q8NGQ2 317 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 PRRT1Q99946 306 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 COMMD5Q9GZQ3 224 aa18.01■□□□□ 0.47
NEK9-203ENST00000553945 DUS4LO95620 317 aaKnown RBP18■□□□□ 0.47
NEK9-203ENST00000553945 SERPINE2P07093 398 aa18■□□□□ 0.47
NEK9-203ENST00000553945 CTSDP07339 412 aaPredicted RBP18■□□□□ 0.47
NEK9-203ENST00000553945 OR8U8P0C7N1 319 aa18■□□□□ 0.47
NEK9-203ENST00000553945 PTBP1P26599 531 aaKnown RBP eCLIP18■□□□□ 0.47
NEK9-203ENST00000553945 MCUBQ9NWR8 336 aa18■□□□□ 0.47
NEK9-203ENST00000553945 C14orf166Q9Y224 244 aaKnown RBP18■□□□□ 0.47
NEK9-203ENST00000553945 SNAPC5O75971 98 aa17.99■□□□□ 0.47
NEK9-203ENST00000553945 OR2B8PP59922 312 aa17.99■□□□□ 0.47
NEK9-203ENST00000553945 KPRPQ5T749 579 aaPredicted RBP17.99■□□□□ 0.47
NEK9-203ENST00000553945 TRIM63Q969Q1 353 aa17.99■□□□□ 0.47
NEK9-203ENST00000553945 TP53RKQ96S44 253 aa17.99■□□□□ 0.47
NEK9-203ENST00000553945 MCRIP2Q9BUT9 160 aaKnown RBP17.99■□□□□ 0.47
NEK9-203ENST00000553945 IGHV4OR15-8A0A075B7B6 117 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 A0A087WW49 117 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 C3orf85A0A1B0GTC6 90 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 CGB1A6NKQ9 187 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 LINC01619G3V211 115 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 H0Y980 276 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 IGKV1-39P01597 117 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 IGKV1D-39P04432 117 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 HSPB1P04792 205 aaKnown RBP17.98■□□□□ 0.47
NEK9-203ENST00000553945 AREGP15514 252 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 ETV6P41212 452 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 SLC2A8Q9NY64 477 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 SCP2D1Q9UJQ7 156 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 ZNF257Q9Y2Q1 563 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 NSG2Q9Y328 171 aa17.98■□□□□ 0.47
NEK9-203ENST00000553945 NPIPB5A8MRT5 1133 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 RBMXL2O75526 392 aaKnown RBP17.97■□□□□ 0.47
NEK9-203ENST00000553945 REG1AP05451 166 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 FGF2P09038 288 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 AP3S2P59780 193 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 RHOGP84095 191 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 ZNF45Q02386 682 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 KLF9Q13886 244 aaPredicted RBP17.97■□□□□ 0.47
NEK9-203ENST00000553945 SURF2Q15527 256 aaPredicted RBP17.97■□□□□ 0.47
NEK9-203ENST00000553945 C19orf35Q6ZS72 473 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 CADM3Q8N126 398 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 TOMM5Q8N4H5 51 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 SEC22AQ96IW7 307 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 USMG5Q96IX5 58 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 RTBDNQ9BSG5 229 aaPredicted RBP17.97■□□□□ 0.47
NEK9-203ENST00000553945 GPR61Q9BZJ8 451 aa17.97■□□□□ 0.47
NEK9-203ENST00000553945 TEX50A0A1B0GTY4 177 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 ANKRD34BA5PLL1 514 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 PSMB6P28072 239 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 FAUP35544 74 aaKnown RBP17.96■□□□□ 0.47
NEK9-203ENST00000553945 SLURP1P55000 103 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 SP6Q3SY56 376 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 H2BFWTQ7Z2G1 175 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 OR1L8Q8NGR8 309 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 QTRT1Q9BXR0 403 aaKnown RBP17.96■□□□□ 0.47
NEK9-203ENST00000553945 AKIP1Q9NQ31 210 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 OR51B2Q9Y5P1 312 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 DNAH3Q8TD57 4116 aa17.96■□□□□ 0.47
NEK9-203ENST00000553945 FAM223BA6NKX1 122 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 PRB2P02812 416 aaPredicted RBP17.95■□□□□ 0.46
NEK9-203ENST00000553945 TRAPPC2P0DI81 140 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 TRAPPC2BP0DI82 140 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 TRIM16LQ309B1 348 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 FAM223AQ8IWN6 122 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 DCUN1D4Q92564 292 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 TSC22D3Q99576 134 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 HINT2Q9BX68 163 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 SRRQ9GZT4 340 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 C5orf66Q9H5L9 145 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 PRNDQ9UKY0 176 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 GPR132Q9UNW8 380 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 NOTCH3Q9UM47 2321 aa17.95■□□□□ 0.46
NEK9-203ENST00000553945 TRBV9A0A0B4J1U6 114 aa17.94■□□□□ 0.46
NEK9-203ENST00000553945 TEX13DA0A0J9YY54 714 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms