RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 DIAPH2-AS1Q14236 149 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 TMEM128Q5BJH2 165 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 IL17RELQ6ZVW7 336 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 MOB3BQ86TA1 216 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 SLC25A42Q86VD7 318 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 SGPP2Q8IWX5 399 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 CENPSQ8N2Z9 138 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 Q8N6K4 173 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 SIGLECL1Q8N7X8 197 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 ZNF383Q8NA42 475 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 OR4C13Q8NGP0 309 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 OR4S2Q8NH73 311 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 ENKURQ8TC29 256 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 PIFOQ8TCI5 191 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 ZFAND2BQ8WV99 257 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 TCTEX1D2Q8WW35 142 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 C5orf30Q96GV9 206 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 SSX3Q99909 188 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 RTBDNQ9BSG5 229 aaPredicted RBP4.57□□□□□ -1.68
SCAF11-213ENST00000550629 C5orf66Q9H5L9 145 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 PLEKHA2Q9HB19 425 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 RAB18Q9NP72 206 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 VPREB3Q9UKI3 123 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 KCNIP3Q9Y2W7 256 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 NUBP2Q9Y5Y2 271 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 SONP18583 2426 aaKnown RBP4.57□□□□□ -1.68
SCAF11-213ENST00000550629 ARHGAP32A7KAX9 2087 aa4.57□□□□□ -1.68
SCAF11-213ENST00000550629 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 TEX13DA0A0J9YY54 714 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-213ENST00000550629 C3orf85A0A1B0GTC6 90 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 A6NDX4 124 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 H3BUX3 64 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 H7C2Y5 167 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 TCF21O43680 179 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 PEX14O75381 377 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 ATG12O94817 140 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 OR2F2O95006 317 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 HRASP01112 189 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 IGKV1D-33P01593 117 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 IGKV1-33P01594 117 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 IGHV4-59P01825 116 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 SERPINE2P07093 398 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 SNRNP70P08621 437 aaKnown RBP4.56□□□□□ -1.68
SCAF11-213ENST00000550629 ANXA3P12429 323 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
SCAF11-213ENST00000550629 DHODHQ02127 395 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 SLC9A3R2Q15599 337 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 RGS21Q2M5E4 152 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 ODF3L2Q3SX64 289 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 PHLDA2Q53GA4 152 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 KIAA2026Q5HYC2 2103 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 PIK3CD-AS1Q5SR53 167 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 PLET1Q6UQ28 207 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 Q71RC1 249 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-213ENST00000550629 NRARPQ7Z6K4 114 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 TMED4Q7Z7H5 227 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 TBC1D26Q86UD7 250 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 SPAG16Q8N0X2 631 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 DRAXINQ8NBI3 349 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-213ENST00000550629 MINDY2Q8NBR6 621 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 NPBQ8NG41 125 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 CAPSLQ8WWF8 208 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 C22orf15Q8WYQ4 148 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 IL22RA2Q969J5 263 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 FLYWCH2Q96CP2 140 aaKnown RBP4.56□□□□□ -1.68
SCAF11-213ENST00000550629 GALNT14Q96FL9 552 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 TSNAXQ99598 290 aaKnown RBP4.56□□□□□ -1.68
SCAF11-213ENST00000550629 MARVELD1Q9BSK0 173 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 TMEM222Q9H0R3 208 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 C20orf85Q9H1P6 137 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 NAA60Q9H7X0 242 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 SLC35D1Q9NTN3 355 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 NUDT15Q9NV35 164 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 C1RLQ9NZP8 487 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 COMMD9Q9P000 198 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 ZNF580Q9UK33 172 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 TCF19Q9Y242 345 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 VSIG4Q9Y279 399 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 WNK2Q9Y3S1 2297 aa4.56□□□□□ -1.68
SCAF11-213ENST00000550629 TEP1Q99973 2627 aaKnown RBP4.56□□□□□ -1.68
SCAF11-213ENST00000550629 SETD2Q9BYW2 2564 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-213ENST00000550629 MDFIC2A0A1B0GVS7 189 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 FGF16O43320 207 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 TNFSF12O43508 249 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 CREBL2O60519 120 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-213ENST00000550629 PRAF2O60831 178 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 FCGR3BO75015 233 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 DUS4LO95620 317 aaKnown RBP4.55□□□□□ -1.68
SCAF11-213ENST00000550629 CDS2O95674 445 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 HPRT1P00492 218 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 IGKV1-16P04430 117 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 NQO2P16083 231 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 TMEM11P17152 192 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 AKR1C4P17516 323 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 UCP1P25874 307 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 BRWD1-AS2P59051 145 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 UBE2KP61086 200 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 RPL30P62888 115 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms