RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 KLF3P57682 345 aaPredicted RBP11.26□□□□□ -0.61
BNIP3-202ENST00000540159 LOXL3P58215 753 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 SLC25A15Q9Y619 301 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 GFRA3O60609 400 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 HPRT1P00492 218 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 FRMD6-AS1P0C7T7 363 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 ATP6V1FQ16864 119 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 FAM90A1Q86YD7 464 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 OR2T10Q8NGZ9 312 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 MRPL37Q9BZE1 423 aaKnown RBP11.26□□□□□ -0.61
BNIP3-202ENST00000540159 WDR83OSQ9Y284 106 aa11.26□□□□□ -0.61
BNIP3-202ENST00000540159 TMPRSS2O15393 492 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 HRASP01112 189 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 MBP02144 154 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 ADH4P08319 380 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 OR10J4P0C629 311 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
BNIP3-202ENST00000540159 IGFBP2P18065 325 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 RELBQ01201 579 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 OR4P4Q8NGL7 312 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 GGTLC1Q9BX51 225 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 PLSCR4Q9NRQ2 329 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 TIMM9Q9Y5J7 89 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 DMRT1Q9Y5R6 373 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 WNK2Q9Y3S1 2297 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 MGST3O14880 152 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 OR5I1Q13606 314 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
BNIP3-202ENST00000540159 OR4A47Q6IF82 309 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 LINC01551Q86U37 167 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 SGMS2Q8NHU3 365 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 SRD5A3Q9H8P0 318 aa11.25□□□□□ -0.61
BNIP3-202ENST00000540159 YTHDF2Q9Y5A9 579 aaKnown RBP11.25□□□□□ -0.61
BNIP3-202ENST00000540159 TMEM250H0YL14 139 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
BNIP3-202ENST00000540159 IL3RAP26951 378 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 OR10W1Q8NGF6 305 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 OR1P1Q8NH06 330 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 MANBALQ9NQG1 85 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 DYSFO75923 2080 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 DVL1O14640 695 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 CA2P00918 260 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 IGLV1-44P01699 117 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 WNT2P09544 360 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 PRR7Q8TB68 274 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 HIST1H1BP16401 226 aaKnown RBP11.24□□□□□ -0.61
BNIP3-202ENST00000540159 GPX4P36969 197 aaPredicted RBP11.24□□□□□ -0.61
BNIP3-202ENST00000540159 SPCS3P61009 180 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 MRPS11P82912 194 aaKnown RBP11.24□□□□□ -0.61
BNIP3-202ENST00000540159 MRPL41Q8IXM3 137 aaKnown RBP11.24□□□□□ -0.61
BNIP3-202ENST00000540159 TMEM256Q8N2U0 113 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 CTDSP1Q9GZU7 261 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 TMEM242Q9NWH2 141 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 PITPNC1Q9UKF7 332 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 FAM215AQ9Y5M1 114 aa11.24□□□□□ -0.61
BNIP3-202ENST00000540159 CGAP01215 116 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 NUBP1P53384 320 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 TNFAIP6P98066 277 aaPredicted RBP11.23□□□□□ -0.61
BNIP3-202ENST00000540159 C17orf58Q2M2W7 97 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 HLA-DRB5Q30154 266 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 STPG3Q8N7X2 389 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 LOXL4Q96JB6 756 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 GCM1Q9NP62 436 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 NUPR1O60356 82 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 CCL3L1P16619 93 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 HTD2P86397 168 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 MBNL2Q5VZF2 373 aaKnown RBP11.23□□□□□ -0.61
BNIP3-202ENST00000540159 CENPVQ7Z7K6 275 aaPredicted RBP11.23□□□□□ -0.61
BNIP3-202ENST00000540159 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 C1orf159Q96HA4 380 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 MALRD1Q5VYJ5 2156 aa11.23□□□□□ -0.61
BNIP3-202ENST00000540159 IL6RP08887 468 aaPredicted RBP11.22□□□□□ -0.61
BNIP3-202ENST00000540159 NPY1RP25929 384 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 MIR17HGQ75NE6 70 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 WFDC8Q8IUA0 241 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 TMEM183AQ8IXX5 376 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 ZADH2Q8N4Q0 377 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 OCC1Q8TAD7 63 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 ENY2Q9NPA8 101 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 JPT1Q9UK76 154 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 TP53TG5Q9Y2B4 290 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 RAI1Q7Z5J4 1906 aaPredicted RBP11.22□□□□□ -0.61
BNIP3-202ENST00000540159 DSCAML1Q8TD84 2053 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 SRRM4A7MD48 611 aaKnown RBP11.22□□□□□ -0.61
BNIP3-202ENST00000540159 F6UZH7 168 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 CBLN1P23435 193 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 VDAC2P45880 294 aaPredicted RBP11.22□□□□□ -0.61
BNIP3-202ENST00000540159 RPL31P62899 125 aaKnown RBP11.22□□□□□ -0.61
BNIP3-202ENST00000540159 SLC24A4Q8NFF2 622 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 ELOA3CA0A087WX78 387 aaPredicted RBP11.22□□□□□ -0.61
BNIP3-202ENST00000540159 A0A087X0M5 115 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 A0A1B0GX30 115 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 ZNF729A6NN14 1252 aaPredicted RBP11.22□□□□□ -0.61
BNIP3-202ENST00000540159 TCL1AP56279 114 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 PPP1R35Q8TAP8 253 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 TRAPPC1Q9Y5R8 145 aa11.22□□□□□ -0.61
BNIP3-202ENST00000540159 ARHGAP32A7KAX9 2087 aa11.21□□□□□ -0.61
BNIP3-202ENST00000540159 A0A1B0GV90 55 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms