RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	IGHV3-49	A0A0A0MS15	119 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TCRBV4S1A1T	A0A5B7	111 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	PQLC2L	A1A4F0	135 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	IGHV3-11	P01762	117 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CYP2G1P	Q6ZSU1	146 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	C1QL2	Q7Z5L3	287 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZFC3H1	O60293	1989 aa	Known RBP	13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532		A0A0G2JK05	382 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	BTF3	P20290	206 aa	Known RBP	13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SULT1A2	P50226	295 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZNF672	Q499Z4	452 aa	Predicted RBP	13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SMUG1	Q53HV7	270 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SSC4D	Q8WTU2	575 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	RAB24	Q969Q5	203 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SH3BGRL3	Q9H299	93 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	FUT9	Q9Y231	359 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	C5orf52	A6NGY3	159 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZNF207	O43670	478 aa	Known RBP	13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TMEM177	Q53S58	311 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZNF385C	Q66K41	422 aa	Predicted RBP	13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SDK2	Q58EX2	2172 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	FAM74A4	Q5TZK3	123 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532		Q6ZS92	163 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TRAV40	A0A0B4J280	105 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532		B4DSR2	109 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	GCG	P01275	180 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	RPL29	P47914	159 aa	Known RBP	13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	C2orf83	Q53S99	150 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZMAT5	Q9UDW3	170 aa	Known RBP	13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	AKAP6	Q13023	2319 aa		13.24	□□□□□ -0.29
NCAPD3-213	ENST00000534532	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CD74	P04233	296 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TMEM262	E9PQX1	116 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532		H3BTX0	84 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TBX6	O95947	436 aa	Predicted RBP	13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	MT-ND6	P03923	174 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CYB5R2	Q6BCY4	276 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	LINC00305	Q7Z4B0	112 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SPSB4	Q96A44	273 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SLC25A28	Q96A46	364 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ELF5	Q9UKW6	265 aa	Predicted RBP	13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532		M0R143	59 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZNF502	Q8TBZ5	544 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SRSF12	Q8WXF0	261 aa	Known RBP	13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	MSGN1	A6NI15	193 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CD81	P60033	236 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	WDR82	Q6UXN9	313 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	GOLT1A	Q6ZVE7	132 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532		A0A0G2JMZ2	1700 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	LRRC37A2	A6NM11	1700 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	AMY1A	P04745	511 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	WNT2	P09544	360 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532		S4R3C0	116 aa		13.23	□□□□□ -0.29
NCAPD3-213	ENST00000534532	IGHV1-46	P01743	117 aa		13.22	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ARL14EPL	P0DKL9	152 aa		13.22	□□□□□ -0.29
NCAPD3-213	ENST00000534532	AP4M1	O00189	453 aa		13.22	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CA7	P43166	264 aa		13.22	□□□□□ -0.29
NCAPD3-213	ENST00000534532		H7C1H1	209 aa		13.22	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ANGPTL6	Q8NI99	470 aa		13.22	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SIPA1L1	O43166	1804 aa		13.22	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TRAV34	A0A0B4J273	112 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	IGHV3-66	A0A0C4DH42	116 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CYB561D1	Q8N8Q1	229 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ISOC2	Q96AB3	205 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	DUX3	Q96PT4	197 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TUBGCP6	Q96RT7	1819 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532		K7ENP7	123 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	YPEL1	O60688	119 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	YPEL2	Q96QA6	119 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	GGACT	Q9BVM4	153 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	WNT10A	Q9GZT5	417 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	PLSCR2	Q9NRY7	297 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	NPFF	O15130	113 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SNRPE	P62304	92 aa	Known RBP	13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	PAPPA-AS1	Q5QFB9	102 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	KIR2DL4	Q99706	377 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	MAP1LC3A	Q9H492	121 aa		13.21	□□□□□ -0.29
NCAPD3-213	ENST00000534532	COL6A6	A6NMZ7	2263 aa		13.21	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TP53RK	Q96S44	253 aa		13.21	□□□□□ -0.3
NCAPD3-213	ENST00000534532	THADA	Q6YHU6	1953 aa		13.21	□□□□□ -0.3
NCAPD3-213	ENST00000534532	C17orf98	A8MV24	154 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532		C9JCJ5	164 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MDS2	Q8NDY4	140 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	ZFP30	Q9Y2G7	519 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532		A0A1B0GTI1	187 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	NUDT3	O95989	172 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	KLK2	P20151	261 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TNFRSF14	Q92956	283 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	NPIPB7	O75200	414 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	HSPB1	P04792	205 aa	Known RBP	13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	ICAM4	Q14773	271 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TCF24	Q7RTU0	167 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	AQP10	Q96PS8	301 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	MESP1	Q9BRJ9	268 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	HTN3	P15516	51 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	CRYBB3	P26998	211 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	RND3	P61587	244 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	TBX15	Q96SF7	602 aa		13.2	□□□□□ -0.3
NCAPD3-213	ENST00000534532	CACNG8	Q8WXS5	425 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms