RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CLDN25C9JDP6 229 aa2.53□□□□□ -2
CD44-219ENST00000525685 LOC110117498-PIK3R3F6TDL0 507 aa2.53□□□□□ -2
CD44-219ENST00000525685 H3BSH0 61 aa2.53□□□□□ -2
CD44-219ENST00000525685 M0QZK8 103 aa2.53□□□□□ -2
CD44-219ENST00000525685 SULT1C4O75897 302 aa2.53□□□□□ -2
CD44-219ENST00000525685 DHRS3O75911 302 aa2.53□□□□□ -2
CD44-219ENST00000525685 FBP1P09467 338 aa2.53□□□□□ -2
CD44-219ENST00000525685 TACSTD2P09758 323 aa2.53□□□□□ -2
CD44-219ENST00000525685 RBMY1DP0C7P1 496 aaKnown RBP2.53□□□□□ -2
CD44-219ENST00000525685 LIMS3P0CW19 117 aa2.53□□□□□ -2
CD44-219ENST00000525685 LIMS4P0CW20 117 aa2.53□□□□□ -2
CD44-219ENST00000525685 RBMY1A1P0DJD3 496 aaKnown RBP2.53□□□□□ -2
CD44-219ENST00000525685 RAB3AP20336 220 aa2.53□□□□□ -2
CD44-219ENST00000525685 PCMT1P22061 227 aa2.53□□□□□ -2
CD44-219ENST00000525685 CCL1P22362 96 aa2.53□□□□□ -2
CD44-219ENST00000525685 TGFBR2P37173 567 aa2.53□□□□□ -2
CD44-219ENST00000525685 PMELP40967 661 aa2.53□□□□□ -2
CD44-219ENST00000525685 CRYBB2P43320 205 aa2.53□□□□□ -2
CD44-219ENST00000525685 GPR6P46095 362 aaPredicted RBP2.53□□□□□ -2
CD44-219ENST00000525685 SRP9P49458 86 aaKnown RBP2.53□□□□□ -2
CD44-219ENST00000525685 DLX1P56177 255 aa2.53□□□□□ -2
CD44-219ENST00000525685 OR12D2P58182 307 aa2.53□□□□□ -2
CD44-219ENST00000525685 RPL23AP62750 156 aaKnown RBP2.53□□□□□ -2
CD44-219ENST00000525685 LOXL1Q08397 574 aaPredicted RBP2.53□□□□□ -2
CD44-219ENST00000525685 PRDX4Q13162 271 aa2.53□□□□□ -2
CD44-219ENST00000525685 OR8G1Q15617 311 aa2.53□□□□□ -2
CD44-219ENST00000525685 C5orf64Q2M2E5 130 aa2.53□□□□□ -2
CD44-219ENST00000525685 TMEM249Q2WGJ8 235 aa2.53□□□□□ -2
CD44-219ENST00000525685 C6orf52Q5T4I8 152 aa2.53□□□□□ -2
CD44-219ENST00000525685 BCL2L15Q5TBC7 163 aa2.53□□□□□ -2
CD44-219ENST00000525685 HACD4Q5VWC8 232 aa2.53□□□□□ -2
CD44-219ENST00000525685 PLCXD3Q63HM9 321 aa2.53□□□□□ -2
CD44-219ENST00000525685 IZUMO2Q6UXV1 221 aa2.53□□□□□ -2
CD44-219ENST00000525685 AHSA2Q719I0 299 aa2.53□□□□□ -2
CD44-219ENST00000525685 SSX9Q7RTT3 188 aa2.53□□□□□ -2
CD44-219ENST00000525685 ZNF429Q86V71 674 aa2.53□□□□□ -2
CD44-219ENST00000525685 C8orf59Q8N0T1 100 aaPredicted RBP2.53□□□□□ -2
CD44-219ENST00000525685 SYS1Q8N2H4 156 aa2.53□□□□□ -2
CD44-219ENST00000525685 C6orf223Q8N319 242 aa2.53□□□□□ -2
CD44-219ENST00000525685 ACBD7Q8N6N7 88 aa2.53□□□□□ -2
CD44-219ENST00000525685 YIPF7Q8N8F6 280 aa2.53□□□□□ -2
CD44-219ENST00000525685 OR13G1Q8NGZ3 307 aa2.53□□□□□ -2
CD44-219ENST00000525685 CLDND2Q8NHS1 167 aa2.53□□□□□ -2
CD44-219ENST00000525685 GRPEL2Q8TAA5 225 aa2.53□□□□□ -2
CD44-219ENST00000525685 ZNF420Q8TAQ5 688 aaPredicted RBP2.53□□□□□ -2
CD44-219ENST00000525685 OR51E1Q8TCB6 317 aa2.53□□□□□ -2
CD44-219ENST00000525685 GPX8Q8TED1 209 aa2.53□□□□□ -2
CD44-219ENST00000525685 CACNG8Q8WXS5 425 aa2.53□□□□□ -2
CD44-219ENST00000525685 C22orf15Q8WYQ4 148 aa2.53□□□□□ -2
CD44-219ENST00000525685 MAFIPQ8WZ33 124 aa2.53□□□□□ -2
CD44-219ENST00000525685 RORBQ92753 470 aa2.53□□□□□ -2
CD44-219ENST00000525685 UFD1Q92890 307 aa2.53□□□□□ -2
CD44-219ENST00000525685 EMG1Q92979 244 aaKnown RBP2.53□□□□□ -2
CD44-219ENST00000525685 MRPL48Q96GC5 212 aaKnown RBP2.53□□□□□ -2
CD44-219ENST00000525685 PRRT1Q99946 306 aa2.53□□□□□ -2
CD44-219ENST00000525685 SMR3AQ99954 134 aa2.53□□□□□ -2
CD44-219ENST00000525685 ZNF251Q9BRH9 671 aa2.53□□□□□ -2
CD44-219ENST00000525685 HDHD3Q9BSH5 251 aaPredicted RBP2.53□□□□□ -2
CD44-219ENST00000525685 ANKRD60Q9BZ19 345 aa2.53□□□□□ -2
CD44-219ENST00000525685 OR51M1Q9H341 326 aa2.53□□□□□ -2
CD44-219ENST00000525685 FGF20Q9NP95 211 aaPredicted RBP2.53□□□□□ -2
CD44-219ENST00000525685 GPR84Q9NQS5 396 aa2.53□□□□□ -2
CD44-219ENST00000525685 INPP5EQ9NRR6 644 aa2.53□□□□□ -2
CD44-219ENST00000525685 TMEM106BQ9NUM4 274 aa2.53□□□□□ -2
CD44-219ENST00000525685 TMEM100Q9NV29 134 aa2.53□□□□□ -2
CD44-219ENST00000525685 COA4Q9NYJ1 87 aa2.53□□□□□ -2
CD44-219ENST00000525685 ZNF391Q9UJN7 358 aa2.53□□□□□ -2
CD44-219ENST00000525685 GNG8Q9UK08 70 aa2.53□□□□□ -2
CD44-219ENST00000525685 KLK12Q9UKR0 248 aa2.53□□□□□ -2
CD44-219ENST00000525685 SLC22A13Q9Y226 551 aa2.53□□□□□ -2
CD44-219ENST00000525685 RHBDD3Q9Y3P4 386 aa2.53□□□□□ -2
CD44-219ENST00000525685 HSPE1-MOB4S4R3N1 261 aa2.53□□□□□ -2
CD44-219ENST00000525685 V9GYS6 101 aa2.53□□□□□ -2
CD44-219ENST00000525685 PRRC2CQ9Y520 2896 aaKnown RBP2.53□□□□□ -2
CD44-219ENST00000525685 HEATR1Q9H583 2144 aaKnown RBP2.53□□□□□ -2.01
CD44-219ENST00000525685 CHD3Q12873 2000 aaKnown RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 CSMD2Q7Z408 3487 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 CADP27708 2225 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 ANK3Q12955 4377 aaKnown RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 A0A1B0GVI7 797 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 IRGMA1A4Y4 181 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 ISPDA4D126 451 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 RFPL4AA6NLU0 287 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 OR4C45A6NMZ5 311 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 RFPL4AL1F8VTS6 287 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 J3QLW9 94 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 CCRL2O00421 344 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 TCAPO15273 167 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 CD5LO43866 347 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 MED6O75586 246 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 GATBO75879 557 aaKnown RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 FADS2O95864 444 aaKnown RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 CYB5R3P00387 301 aaPredicted RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 CST4P01036 141 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 IGHV2-5P01817 119 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 HTR1AP08908 422 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 CHTF8P0CG12 524 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 UBCP0CG48 685 aaKnown RBP2.52□□□□□ -2.01
CD44-219ENST00000525685 SMIM6P0DI80 62 aa2.52□□□□□ -2.01
CD44-219ENST00000525685 PIPP12273 146 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms