RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 GCM1Q9NP62 436 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 WDR83OSQ9Y284 106 aa9.11□□□□□ -0.95
SH3RF1-203ENST00000508685 TMPRSS2O15393 492 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 RBFOX2O43251 390 aaKnown RBP eCLIP9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 GYPAP02724 150 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 CD55P08174 381 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 CFHR2P36980 270 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 KIR2DS2P43631 304 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 TNFAIP6P98066 277 aaPredicted RBP9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 KLRB1Q12918 225 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 ADIPOQQ15848 244 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 C4orf17Q53FE4 359 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 PDLIM3Q53GG5 364 aaPredicted RBP9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 LBHQ53QV2 105 aaPredicted RBP9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 ZNF808Q8N4W9 903 aaPredicted RBP9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 SNX22Q96L94 193 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 RAB9BQ9NP90 201 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 GAB2Q9UQC2 676 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 ZNF462Q96JM2 2506 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 MARCH11A6NNE9 402 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 C11orf94C9JXX5 98 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 LHBP01229 141 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 OR4A8P0C604 315 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 SELLP14151 372 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 CD1BP29016 333 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 SPCS3P61009 180 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 CCL8P80075 99 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 REC114Q7Z4M0 266 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 RFESDQ8TAC1 157 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 R3HDM4Q96D70 268 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 DCAF16Q9NXF7 216 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 IL19Q9UHD0 177 aa9.1□□□□□ -0.95
SH3RF1-203ENST00000508685 HRNRQ86YZ3 2850 aaPredicted RBP9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 IGHV3-43A0A0B4J1X8 118 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 A0A1W2PPV4 95 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 PAGE4O60829 102 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 IGHV3-43DP0DP04 118 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 OPRK1P41145 380 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 GATA4P43694 442 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 BRWD1-AS2P59051 145 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 PDZD11Q5EBL8 140 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 C9orf152Q5JTZ5 239 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 DUX4L9Q6RFH8 374 aaPredicted RBP9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 C5orf30Q96GV9 206 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 NOL4LQ96MY1 436 aaPredicted RBP9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 TMEM204Q9BSN7 226 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 OR6C3Q9NZP0 311 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 JPT1Q9UK76 154 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 TRBV23-1A0A0A0MS06 115 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 XKRY2A2RUG3 117 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 ITGB1BP1O14713 200 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 YPEL1O60688 119 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 GRNP28799 593 aaKnown RBP9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 GPX4P36969 197 aaPredicted RBP9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 CA7P43166 264 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 GPR12P47775 334 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 SSTP61278 116 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 TFF3Q07654 80 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 FOXL1Q12952 345 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 CR1LQ2VPA4 569 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 ACTL10Q5JWF8 245 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 OR4A16Q8NH70 328 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 TMEM18Q96B42 140 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 YPEL2Q96QA6 119 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 NCOR1P1Q9H4R4 102 aa9.09□□□□□ -0.95
SH3RF1-203ENST00000508685 FAM90A27PA6NNH2 459 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 C15orf62A8K5M9 175 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 DEFB108AA8MXU0 73 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 DDTP30046 118 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 CASP6P55212 293 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 ERVK-16P61578 105 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 GAMTQ14353 236 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 LTC4SQ16873 150 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 NEUROG1Q92886 237 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 PLPPR2Q96GM1 343 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 PSG11Q9UQ72 335 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 DSCAMO60469 2012 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 COL12A1Q99715 3063 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 TACC2O95359 2948 aa9.08□□□□□ -0.96
SH3RF1-203ENST00000508685 A0A1W2PPQ1 181 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 LINC00473A8K010 186 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 C15orf65H3BRN8 121 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 CCL21O00585 134 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 PAX1P15863 534 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 DUTP33316 252 aaKnown RBP9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 EDDM3BP56851 147 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 CDSNQ15517 529 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 Q3ZCU0 254 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 BTNL3Q6UXE8 466 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 DEFB108BQ8NET1 73 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 ZDHHC16Q969W1 377 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 PCGF1Q9BSM1 259 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 RNF7Q9UBF6 113 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 DIDO1Q9BTC0 2240 aaKnown RBP9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 TRAV9-1A0A075B6T8 112 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 MGST3O14880 152 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 HMGB3O15347 200 aaKnown RBP9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 CXorf1O96002 111 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 AMBPP02760 352 aa9.07□□□□□ -0.96
SH3RF1-203ENST00000508685 TNFSF4P23510 183 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms