RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 BSPH1Q075Z2 132 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 NOTCH2NLQ7Z3S9 236 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 RPP25LQ8N5L8 163 aaKnown RBP3.81□□□□□ -1.8
NIPBL-204ENST00000504430 WDR61Q9GZS3 305 aaKnown RBP3.81□□□□□ -1.8
NIPBL-204ENST00000504430 Q9H3A6 140 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 TAF9BQ9HBM6 251 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 THSD7BQ9C0I4 1608 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 CROCCQ5TZA2 2017 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 TRAV30A0A087WSZ9 112 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 TRAV38-1A0A0B4J264 116 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 IFITM10A6NMD0 228 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 MRPS14O60783 128 aaKnown RBP3.81□□□□□ -1.8
NIPBL-204ENST00000504430 APOMO95445 188 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 TDGF1P13385 188 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 NFYBP25208 207 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 BRS3P32247 399 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 DIAPH2-AS1Q14236 149 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 MEIG1Q5JSS6 88 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 TMEM69Q5SWH9 247 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.81□□□□□ -1.8
NIPBL-204ENST00000504430 SDF2L1Q9HCN8 221 aa3.81□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF73O43830 326 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-204ENST00000504430 SCGB1C2P0DMR2 95 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 GNA12Q03113 381 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 Q6ZS49 121 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 KTN1-AS1Q86SY8 53 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 NLRC5Q86WI3 1866 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 GPHB5Q86YW7 130 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 H1FOOQ8IZA3 346 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-204ENST00000504430 ACBD7Q8N6N7 88 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 LINC01555Q8NAE3 123 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 SCGB1C1Q8TD33 95 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 GTSF1Q8WW33 167 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 F2RL3Q96RI0 385 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 ATOH8Q96SQ7 321 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 FAM49BQ9NUQ9 324 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 DEC1Q9P2X7 70 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 NISCHQ9Y2I1 1504 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 SBF1O95248 1867 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 IGHV7-81A0A0B4J1V7 117 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 DPRXA6NFQ7 191 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 TAX1BP3O14907 124 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 PLA2G10O15496 165 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 RPS4Y1P22090 263 aaKnown RBP3.8□□□□□ -1.8
NIPBL-204ENST00000504430 OPRM1P35372 400 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 MEF2BQ02080 365 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-204ENST00000504430 FAM57AQ8TBR7 257 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 ABHD14BQ96IU4 210 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 DERL3Q96Q80 235 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF184Q99676 751 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-204ENST00000504430 PLA2G12AQ9BZM1 189 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 DNAJC12Q9UKB3 198 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 NPHP4O75161 1426 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-204ENST00000504430 IGHV3-35A0A0C4DH35 117 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF860A6NHJ4 632 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 I3L521 148 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 TBL1XO60907 577 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 PPIBP23284 216 aaKnown RBP3.8□□□□□ -1.8
NIPBL-204ENST00000504430 FOXA1P55317 472 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 CDK6Q00534 326 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 VMA21Q3ZAQ7 101 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF709Q8N972 641 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 MRPL30Q8TCC3 161 aaKnown RBP3.8□□□□□ -1.8
NIPBL-204ENST00000504430 PP6455Q8WZ26 134 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 PLEKHF2Q9H8W4 249 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 PLXNB3Q9ULL4 1909 aa3.8□□□□□ -1.8
NIPBL-204ENST00000504430 ZFC3H1O60293 1989 aaKnown RBP3.79□□□□□ -1.8
NIPBL-204ENST00000504430 HES1Q14469 280 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 PYY3Q5JQD4 70 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 OR2T10Q8NGZ9 312 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 DEDD2Q8WXF8 326 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 SLC25A22Q9H936 323 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 MARCOQ9UEW3 520 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-204ENST00000504430 SNRNP200O75643 2136 aaKnown RBP3.79□□□□□ -1.8
NIPBL-204ENST00000504430 DCCP43146 1447 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 K7ERJ3 54 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 DEDDO75618 318 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 DUSP14O95147 198 aaKnown RBP3.79□□□□□ -1.8
NIPBL-204ENST00000504430 PAEPP09466 180 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 H2AFZP0C0S5 128 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 AKAIN1P0CW23 69 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 OR8D4Q8NGM9 314 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 TEX37Q96LM6 180 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 YPEL4Q96NS1 127 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 EIF5A2Q9GZV4 153 aaKnown RBP3.79□□□□□ -1.8
NIPBL-204ENST00000504430 C6orf106Q9H6K1 298 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-204ENST00000504430 HCFC1P51610 2035 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 EML6Q6ZMW3 1958 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 TRAV5A0A0B4J249 113 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-204ENST00000504430 CD28P10747 220 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 TAS2R20P59543 309 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 GKN2Q86XP6 184 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 ZNF555Q8NEP9 628 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 GGTLC1Q9BX51 225 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 COMMD5Q9GZQ3 224 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 SCRT2Q9NQ03 307 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 SPATA31E1Q6ZUB1 1445 aa3.79□□□□□ -1.8
NIPBL-204ENST00000504430 TRBV19A0A075B6N1 114 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms