RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	SCN3B	Q9NY72	215 aa		10.11	□□□□□ -0.79
SAMM50-204	ENST00000493161	HECTD4	Q9Y4D8	3996 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	TRAV3	A0A0B4J244	114 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	UBE2C	O00762	179 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	DHFR	P00374	187 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	HLA-G	P17693	338 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	RAB6A	P20340	208 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	GAL	P22466	123 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	DTYMK	P23919	212 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	PSMA1	P25786	263 aa	Known RBP	10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	OR2B8P	P59922	312 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	CDNF	Q49AH0	187 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	OR5B3	Q8NH48	314 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	NUDCD2	Q8WVJ2	157 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	CXorf58	Q96LI9	332 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	HSD17B10	Q99714	261 aa	Known RBP	10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	ATG5	Q9H1Y0	275 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	DUSP21	Q9H596	190 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	UFC1	Q9Y3C8	167 aa		10.1	□□□□□ -0.79
SAMM50-204	ENST00000493161	IGHV3OR16-8	A0A075B7F1	116 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	KIR2DL5B	A0A0G2JN68	375 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	KIR2DL5B	A0A0G2JPC4	375 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	IGLC7	A0M8Q6	106 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	SMIM30	A4D0T7	59 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	TSPAN4	O14817	238 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	CASQ2	O14958	399 aa	Predicted RBP	10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	TNFSF12	O43508	249 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	ELL	P55199	621 aa	Predicted RBP	10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	NANOS2	P60321	138 aa	Known RBP	10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	ZNF124	Q15973	351 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	SSX1	Q16384	188 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	TIMM50	Q3ZCQ8	353 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	PLET1	Q6UQ28	207 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	APRG1	Q8IVJ8	170 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	KIR2DL5A	Q8N109	375 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	KIR2DL5B	Q8NHK3	375 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	TMEM190	Q8WZ59	177 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	MGLL	Q99685	303 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	MAP6D1	Q9H9H5	199 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	ACOT13	Q9NPJ3	140 aa		10.09	□□□□□ -0.79
SAMM50-204	ENST00000493161	METTL21EP	A6NDL7	271 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	OR2T8	A6NH00	312 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	TGOLN2	O43493	480 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	RGS10	O43665	173 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	ZNF207	O43670	478 aa	Known RBP	10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	SSX5	O60225	188 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	SLC22A5	O76082	557 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	PTHLH	P12272	177 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	PTBP1	P26599	531 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	HACD4	Q5VWC8	232 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	ZNF773	Q6PK81	442 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	OR10W1	Q8NGF6	305 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	CENPO	Q9BU64	300 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	HRASLS	Q9HDD0	168 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	CCL28	Q9NRJ3	127 aa		10.08	□□□□□ -0.8
SAMM50-204	ENST00000493161	IGHV3-21	A0A0B4J1V1	117 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	TRAV1-2	A0A0B4J238	106 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	TMEM235	A6NFC5	223 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	PDCD5	O14737	125 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	HRAS	P01112	189 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	CTXN2	P0C2S0	81 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	CNIH2	Q6PI25	160 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	TMEM217	Q8N7C4	229 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	ZNF414	Q96IQ9	312 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	CHRDL1	Q9BU40	450 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	CCDC90B	Q9GZT6	254 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	BET1L	Q9NYM9	111 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	TPRKB	Q9Y3C4	175 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	RYR1	P21817	5038 aa		10.07	□□□□□ -0.8
SAMM50-204	ENST00000493161	UPK2	O00526	184 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	CTSD	P07339	412 aa	Predicted RBP	10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	RAB3B	P20337	219 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	RANBP1	P43487	201 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	MFAP2	P55001	183 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	ZNF66	Q6ZN08	573 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	OR4A5	Q8NH83	315 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	GATAD1	Q8WUU5	269 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	GALNT14	Q96FL9	552 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	C20orf24	Q9BUV8	137 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	DCSTAMP	Q9H295	470 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	DAZ1	Q9NQZ3	744 aa	Known RBP	10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	FBXL17	Q9UF56	701 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161	ANXA10	Q9UJ72	324 aa		10.06	□□□□□ -0.8
SAMM50-204	ENST00000493161		F8W735	103 aa	Predicted RBP	10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	SULT1C2	O00338	296 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	EBAG9	O00559	213 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	DEFB4A	O15263	64 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	ADM	P35318	185 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	LAMTOR1	Q6IAA8	161 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	SPAG16	Q8N0X2	631 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	C11orf45	Q8TAV5	145 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	CD300LF	Q8TDQ1	290 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	VN1R17P	Q8TDU5	208 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	SECTM1	Q8WVN6	248 aa		10.05	□□□□□ -0.8
SAMM50-204	ENST00000493161	OR4C46	A6NHA9	309 aa		10.04	□□□□□ -0.8
SAMM50-204	ENST00000493161	AQP4	P55087	323 aa		10.04	□□□□□ -0.8
SAMM50-204	ENST00000493161	WT1-AS	Q06250	92 aa		10.04	□□□□□ -0.8
SAMM50-204	ENST00000493161	C22orf42	Q6IC83	251 aa		10.04	□□□□□ -0.8
SAMM50-204	ENST00000493161	PRSS48	Q7RTY5	328 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms