RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 SLC2A9Q9NRM0 540 aa5.48□□□□□ -1.53
TPR-208ENST00000492973 SHPKQ9UHJ6 478 aa5.48□□□□□ -1.53
TPR-208ENST00000492973 KCNIP3Q9Y2W7 256 aa5.48□□□□□ -1.53
TPR-208ENST00000492973 FBN1P35555 2871 aaKnown RBP5.48□□□□□ -1.53
TPR-208ENST00000492973 COL6A5A8TX70 2615 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 A0A0A0MQY5 61 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 TEX13DA0A0J9YY54 714 aaPredicted RBP5.47□□□□□ -1.53
TPR-208ENST00000492973 C3orf85A0A1B0GTC6 90 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 LY6LH3BQJ8 138 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 TNFSF12O43508 249 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 CREBL2O60519 120 aaPredicted RBP5.47□□□□□ -1.53
TPR-208ENST00000492973 DUS4LO95620 317 aaKnown RBP5.47□□□□□ -1.53
TPR-208ENST00000492973 HLA-GP17693 338 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 F2RP25116 425 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 DUTP33316 252 aaKnown RBP5.47□□□□□ -1.53
TPR-208ENST00000492973 GPR12P47775 334 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 PRRX1P54821 245 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 BRWD1-AS2P59051 145 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 RRAS2P62070 204 aaPredicted RBP5.47□□□□□ -1.53
TPR-208ENST00000492973 FCN2Q15485 313 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 SLC9A3R2Q15599 337 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 HLA-DRB5Q30154 266 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 ANKRD55Q3KP44 614 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 SP6Q3SY56 376 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 RPL39P5Q59GN2 51 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 MINOS1Q5TGZ0 78 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 CMTM1Q8IZ96 169 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 LYG1Q8N1E2 194 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.47□□□□□ -1.53
TPR-208ENST00000492973 CASTOR1Q8WTX7 329 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 MITD1Q8WV92 249 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 TP53RKQ96S44 253 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 NEURL2Q9BR09 285 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 MED28Q9H204 178 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 OR2D2Q9H210 308 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 ESM1Q9NQ30 184 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 PIPOXQ9P0Z9 390 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 TBL2Q9Y4P3 447 aaKnown RBP5.47□□□□□ -1.53
TPR-208ENST00000492973 MINOS1-NBL1R4GNA1 71 aa5.47□□□□□ -1.53
TPR-208ENST00000492973 BUB1B-PAK6H3BSN5 160 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 TOR1AO14656 332 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 RAB29O14966 203 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 SSNA1O43805 119 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 VENTXO95231 258 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 CDS2O95674 445 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 HLA-AP01891 365 aaKnown RBP5.46□□□□□ -1.54
TPR-208ENST00000492973 FBP1P09467 338 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 OR5AC1P0C628 307 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 TRAPPC2P0DI81 140 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 TRAPPC2BP0DI82 140 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 SULT1A3P0DMM9 295 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 SULT1A4P0DMN0 295 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 CT45A6P0DMU7 189 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 CT45A5P0DMU8 189 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 CT45A7P0DMV0 189 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 CXCL3P19876 107 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 UCP1P25874 307 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 HTR1DP28221 377 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 ZNF137PP52743 207 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 HILS1P60008 231 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 SCGB2A2Q13296 93 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 DIAPH2-AS1Q14236 149 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 ZNF585BQ52M93 769 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 TPTE2P1Q5T6R2 138 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 C11orf88Q6PI97 169 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 ZNF833PQ6ZTB9 187 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 SELENOHQ8IZQ5 122 aaKnown RBP5.46□□□□□ -1.54
TPR-208ENST00000492973 LRTM2Q8N967 370 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 UXS1Q8NBZ7 420 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 OR11H7Q8NGC8 314 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 LHFPL5Q8TAF8 219 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 PIFOQ8TCI5 191 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 ST6GALNAC6Q969X2 333 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 MALSU1Q96EH3 234 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 TMEM56Q96MV1 263 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 S1PR3Q99500 378 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 PHB2Q99623 299 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 TMEM222Q9H0R3 208 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 DPM3Q9P2X0 92 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 FAM96BQ9Y3D0 163 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 HILPDAQ9Y5L2 63 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 TMEM56-RWDD3S4R434 201 aa5.46□□□□□ -1.54
TPR-208ENST00000492973 STAB1Q9NY15 2570 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 SAA2-SAA4A0A096LPE2 208 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 LEUTXA8MZ59 168 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 H0Y980 276 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 M0R1X1 148 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 B3GALNT1O75752 331 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 SIX6O95475 246 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 IGKV1-39P01597 117 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 IGHV4-59P01825 116 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 IGKV1D-39P04432 117 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 SAA2P0DJI9 122 aaPredicted RBP5.45□□□□□ -1.54
TPR-208ENST00000492973 ANXA3P12429 323 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 S100GP29377 79 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 LPAR6P43657 344 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 IER3P46695 156 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 SSX2Q16385 188 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 LGI3Q8N145 548 aa5.45□□□□□ -1.54
TPR-208ENST00000492973 TCTEX1D1Q8N7M0 179 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms