RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RBM14Q96PK6 669 aaKnown RBP11.38□□□□□ -0.59
USP11-207ENST00000478596 PRR13Q9NZ81 148 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 METTL1Q9UBP6 276 aaKnown RBP11.38□□□□□ -0.59
USP11-207ENST00000478596 PLECQ15149 4684 aaKnown RBP11.38□□□□□ -0.59
USP11-207ENST00000478596 PIGBOS1A0A0B4J2F0 54 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 MARCH11A6NNE9 402 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 FAM90A9PA6NNJ1 464 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 CREBL2O60519 120 aaPredicted RBP11.37□□□□□ -0.59
USP11-207ENST00000478596 RBMXL2O75526 392 aaKnown RBP11.37□□□□□ -0.59
USP11-207ENST00000478596 SFT2D2O95562 160 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 KRASP01116 189 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 SAA1P0DJI8 122 aaPredicted RBP11.37□□□□□ -0.59
USP11-207ENST00000478596 CNTFRP26992 372 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 G6PCP35575 357 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 LGALS7P47929 136 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 GNB1P62873 340 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 TMEM177Q53S58 311 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 LYG2Q86SG7 212 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 VKORC1L1Q8N0U8 176 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 LGI3Q8N145 548 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 UXS1Q8NBZ7 420 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 VSTM2AQ8TAG5 236 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 RRNAD1Q96FB5 475 aaKnown RBP11.37□□□□□ -0.59
USP11-207ENST00000478596 CLCC1Q96S66 551 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 SEC22CQ9BRL7 303 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 TMEM222Q9H0R3 208 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 FBXL15Q9H469 300 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 PLEKHA2Q9HB19 425 aa11.37□□□□□ -0.59
USP11-207ENST00000478596 RRHO14718 337 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 PRAF2O60831 178 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 ACTL6BO94805 426 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 UCP1P25874 307 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 BLCAPP62952 87 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 DHRS2Q13268 280 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 H2BFWTQ7Z2G1 175 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 DUSP18Q8NEJ0 188 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 OR52B4Q8NGK2 314 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 RBPMSQ93062 196 aaKnown RBP11.36□□□□□ -0.59
USP11-207ENST00000478596 RHOVQ96L33 236 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 PRR25Q96S07 402 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 PHB2Q99623 299 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 RNF5Q99942 180 aa11.36□□□□□ -0.59
USP11-207ENST00000478596 FAM212BQ9NTI7 297 aaPredicted RBP11.36□□□□□ -0.59
USP11-207ENST00000478596 C9orf170A2RU37 121 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 F2RL1P55085 397 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 UBE2KP61086 200 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 SUPT4H1P63272 117 aaKnown RBP11.35□□□□□ -0.59
USP11-207ENST00000478596 EBI3Q14213 229 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 PSG5Q15238 335 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 LIN54Q6MZP7 749 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 CENPVQ7Z7K6 275 aaPredicted RBP11.35□□□□□ -0.59
USP11-207ENST00000478596 SBSPONQ8IVN8 264 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 Q8N6K4 173 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 MINDY2Q8NBR6 621 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 OR4X2Q8NGF9 303 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 GALNT14Q96FL9 552 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 TMEM140Q9NV12 185 aa11.35□□□□□ -0.59
USP11-207ENST00000478596 SH2D7A6NKC9 451 aaPredicted RBP11.34□□□□□ -0.59
USP11-207ENST00000478596 FGF16O43320 207 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 SSNA1O43805 119 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 SNAPC5O75971 98 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 KBTBD11O94819 623 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 OR2A4O95047 310 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 CNIH1O95406 144 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 TMEM187Q14656 261 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 TNXAQ16473 311 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 C5orf64Q2M2E5 130 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 ZNF585BQ52M93 769 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 THOC7Q6I9Y2 204 aaKnown RBP11.34□□□□□ -0.59
USP11-207ENST00000478596 OR4A47Q6IF82 309 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 SLC35G3Q8N808 338 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 C5orf56Q8N8D9 126 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 ZNF431Q8TF32 576 aaPredicted RBP11.34□□□□□ -0.59
USP11-207ENST00000478596 RITA1Q96K30 269 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 OR2A7Q96R45 310 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
USP11-207ENST00000478596 NDUFA3O95167 84 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 CA2P00918 260 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 IFNA21P01568 189 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 OR2B8PP59922 312 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 TATDN3Q17R31 274 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 ANKRD55Q3KP44 614 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 Q8N9W7 124 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 OR4A16Q8NH70 328 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 GRPEL2Q8TAA5 225 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 GLYATL2Q8WU03 294 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 IL22RA2Q969J5 263 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 MARVELD1Q9BSK0 173 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 PDCD10Q9BUL8 212 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 PARP11Q9NR21 331 aa11.33□□□□□ -0.6
USP11-207ENST00000478596 FAM25EA8MYX2 175 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 IGLV2-23P01705 113 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 HOXB5P09067 269 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 BRWD1-AS2P59051 145 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 KHDC1LQ5JSQ8 128 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 PPP1R27Q86WC6 154 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 MMD2Q8IY49 270 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 SELENOHQ8IZQ5 122 aaKnown RBP11.32□□□□□ -0.6
USP11-207ENST00000478596 C12orf45Q8N5I9 185 aaPredicted RBP11.32□□□□□ -0.6
USP11-207ENST00000478596 FAM71E2Q8N5Q1 922 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms