RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 ZP3P21754 424 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 ECI1P42126 302 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 LPAR6P43657 344 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 INSL3P51460 131 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 UCP3P55916 312 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 RHOGP84095 191 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 C11orf87Q6NUJ2 197 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 SLC38A6Q8IZM9 456 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 DIRAS2Q96HU8 199 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 RSRP1Q9BUV0 290 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 C6orf62Q9GZU0 229 aaPredicted RBP10.87□□□□□ -0.67
PDE6D-204ENST00000477748 SLC2A9Q9NRM0 540 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 PEF1Q9UBV8 284 aaKnown RBP10.87□□□□□ -0.67
PDE6D-204ENST00000477748 ZNF257Q9Y2Q1 563 aa10.87□□□□□ -0.67
PDE6D-204ENST00000477748 TRAV3A0A0B4J244 114 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 A0A1B0GW64 132 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 CCDC160A6NGH7 325 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 FAM223BA6NKX1 122 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 SAP30O75446 220 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 RBMXL2O75526 392 aaKnown RBP10.86□□□□□ -0.67
PDE6D-204ENST00000477748 PGAM2P15259 253 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 TBPP20226 339 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 TAS2R19P59542 299 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 MRPS10P82664 201 aaKnown RBP10.86□□□□□ -0.67
PDE6D-204ENST00000477748 ZNF45Q02386 682 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 ATP5G2Q06055 141 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 IL18Q14116 193 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 ZNF343Q6P1L6 599 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 TBC1D26Q86UD7 250 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 ZNF429Q86V71 674 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 FAM223AQ8IWN6 122 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 ARRDC1Q8N5I2 433 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 TMEM229BQ8NBD8 167 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 COMMD5Q9GZQ3 224 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 AKIP1Q9NQ31 210 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 CEPT1Q9Y6K0 416 aa10.86□□□□□ -0.67
PDE6D-204ENST00000477748 TRBV9A0A0B4J1U6 114 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 MARCH11A6NNE9 402 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 NPIPB5A8MRT5 1133 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 OR2J3O76001 311 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 KRASP01116 189 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 NHLRC4P0CG21 123 aaPredicted RBP10.85□□□□□ -0.67
PDE6D-204ENST00000477748 AREGP15514 252 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 PSMB6P28072 239 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 SSBP1Q04837 148 aaKnown RBP10.85□□□□□ -0.67
PDE6D-204ENST00000477748 ZNF585BQ52M93 769 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 NECAP1Q8NC96 275 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 SLIRPQ9GZT3 109 aaKnown RBP10.85□□□□□ -0.67
PDE6D-204ENST00000477748 RABL2AQ9UBK7 228 aaPredicted RBP10.85□□□□□ -0.67
PDE6D-204ENST00000477748 RABL2BQ9UNT1 228 aa10.85□□□□□ -0.67
PDE6D-204ENST00000477748 SORL1Q92673 2214 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 CGB1A6NKQ9 187 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 RAB3DO95716 219 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 DHFRP00374 187 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 TRBV12-3P01733 135 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 CD74P04233 296 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 CRYGCP07315 174 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 G6PCP35575 357 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 OR2B8PP59922 312 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 EXOSC2Q13868 293 aaKnown RBP10.84□□□□□ -0.67
PDE6D-204ENST00000477748 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 STEAP1BQ6NZ63 245 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 ACSM6Q6P461 480 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 C19orf35Q6ZS72 473 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 LHFPL1Q86WI0 220 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 OR4D10Q8NGI6 311 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 MCFD2Q8NI22 146 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 SMIM4Q8WVI0 70 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 WWC2-AS2Q96NR7 200 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 OR4C12Q96R67 309 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 PRR25Q96S07 402 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 ELOVL1Q9BW60 279 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 FAM212BQ9NTI7 297 aaPredicted RBP10.84□□□□□ -0.67
PDE6D-204ENST00000477748 FBXL7Q9UJT9 491 aa10.84□□□□□ -0.67
PDE6D-204ENST00000477748 ZNF256Q9Y2P7 627 aaPredicted RBP10.84□□□□□ -0.67
PDE6D-204ENST00000477748 LSM4Q9Y4Z0 139 aaKnown RBP10.84□□□□□ -0.67
PDE6D-204ENST00000477748 CTDSPLO15194 276 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 SNAPC5O75971 98 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 LY86O95711 162 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 REG1AP05451 166 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 FGF2P09038 288 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 DEFA4P12838 97 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 CTRB1P17538 263 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 PI3P19957 117 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 PPP5CP53041 499 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 RPEL1Q2QD12 228 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 C15orf32Q32M92 178 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 SCGB2B2Q4G0G5 96 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 CTRB2Q6GPI1 263 aa10.83□□□□□ -0.68
PDE6D-204ENST00000477748 ZNF486Q96H40 463 aaPredicted RBP10.83□□□□□ -0.68
PDE6D-204ENST00000477748 TRAPPC2P0DI81 140 aa10.82□□□□□ -0.68
PDE6D-204ENST00000477748 TRAPPC2BP0DI82 140 aa10.82□□□□□ -0.68
PDE6D-204ENST00000477748 HIST1H1BP16401 226 aaKnown RBP10.82□□□□□ -0.68
PDE6D-204ENST00000477748 TNFSF8P32971 234 aa10.82□□□□□ -0.68
PDE6D-204ENST00000477748 PIGPP57054 158 aa10.82□□□□□ -0.68
PDE6D-204ENST00000477748 SYNJ2BPP57105 145 aa10.82□□□□□ -0.68
PDE6D-204ENST00000477748 RND3P61587 244 aa10.82□□□□□ -0.68
PDE6D-204ENST00000477748 KLF5Q13887 457 aaPredicted RBP10.82□□□□□ -0.68
PDE6D-204ENST00000477748 MEF2DQ14814 521 aa10.82□□□□□ -0.68
PDE6D-204ENST00000477748 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms