RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 KIAA0141Q14154 515 aaPredicted RBP10.72□□□□□ -0.69
ATG9A-220ENST00000475339 TNXAQ16473 311 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 PRSS8Q16651 343 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 PHLDA2Q53GA4 152 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 SLC38A6Q8IZM9 456 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 VKORC1L1Q8N0U8 176 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 TMEM229BQ8NBD8 167 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 LFNGQ8NES3 379 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 MYOZ3Q8TDC0 251 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 UBE2E2Q96LR5 201 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 TINAGL1Q9GZM7 467 aaPredicted RBP10.72□□□□□ -0.69
ATG9A-220ENST00000475339 NXF2Q9GZY0 626 aaKnown RBP10.72□□□□□ -0.69
ATG9A-220ENST00000475339 KLK15Q9H2R5 256 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 TUBA4BQ9H853 241 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 HERC1Q15751 4861 aa10.72□□□□□ -0.69
ATG9A-220ENST00000475339 FABP12A6NFH5 140 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 ARPC1BO15143 372 aaKnown RBP10.71□□□□□ -0.69
ATG9A-220ENST00000475339 CTDSPLO15194 276 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 MPPED1O15442 326 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 RBFOX2O43251 390 aaKnown RBP eCLIP10.71□□□□□ -0.69
ATG9A-220ENST00000475339 OR2A4O95047 310 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 RAB3DO95716 219 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 PPIFP30405 207 aaKnown RBP10.71□□□□□ -0.69
ATG9A-220ENST00000475339 TNFSF8P32971 234 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 ERVK-16P61578 105 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 RUNX1Q01196 453 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 PJVKQ0ZLH3 352 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 AKIRIN2Q53H80 203 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 STEAP1BQ6NZ63 245 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 SSX9Q7RTT3 188 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 MMD2Q8IY49 270 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 ARRDC1Q8N5I2 433 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 MINDY2Q8NBR6 621 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 OR2A7Q96R45 310 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 OR4C12Q96R67 309 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 ZNF430Q9H8G1 570 aaPredicted RBP10.71□□□□□ -0.69
ATG9A-220ENST00000475339 ZNF355PQ9NSJ1 428 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 VSIG4Q9Y279 399 aa10.71□□□□□ -0.69
ATG9A-220ENST00000475339 PGLYRP1O75594 196 aaPredicted RBP10.7□□□□□ -0.7
ATG9A-220ENST00000475339 HPRT1P00492 218 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 IGLV1-40P01703 118 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 EGR2P11161 476 aaPredicted RBP10.7□□□□□ -0.7
ATG9A-220ENST00000475339 PPP5CP53041 499 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 MEF2DQ14814 521 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 SCGB2B2Q4G0G5 96 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 ZNF491Q8N8L2 437 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 SRSF12Q8WXF0 261 aaKnown RBP10.7□□□□□ -0.7
ATG9A-220ENST00000475339 RHOVQ96L33 236 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 ALX4Q9H161 411 aaPredicted RBP10.7□□□□□ -0.7
ATG9A-220ENST00000475339 HRASLSQ9HDD0 168 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 NDUFA13Q9P0J0 144 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 NUBP2Q9Y5Y2 271 aa10.7□□□□□ -0.7
ATG9A-220ENST00000475339 DYNC1H1Q14204 4646 aaKnown RBP10.7□□□□□ -0.7
ATG9A-220ENST00000475339 DISC1C4P0D8 188 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 KBTBD11O94819 623 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 S1PR2O95136 353 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 CD74P04233 296 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 NQO2P16083 231 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 RAB9AP51151 201 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 UCP3P55916 312 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 TAS2R31P59538 309 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 PYDC2Q56P42 97 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 C19orf54Q5BKX5 351 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 DMBX1Q8NFW5 382 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 CASTOR1Q8WTX7 329 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 DGCR14Q96DF8 476 aaKnown RBP10.69□□□□□ -0.7
ATG9A-220ENST00000475339 TMEM68Q96MH6 324 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 SPIN2AQ99865 258 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 SPIN2BQ9BPZ2 258 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 RSRP1Q9BUV0 290 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 PLA2G2EQ9NZK7 142 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 COMMD9Q9P000 198 aa10.69□□□□□ -0.7
ATG9A-220ENST00000475339 DNAH11Q96DT5 4516 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 NUPR2A6NF83 97 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 MSGN1A6NI15 193 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 SOX15O60248 233 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 AKAIN1P0CW23 69 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 APELAP0DMC3 54 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 F2RP25116 425 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 BRWD1-AS2P59051 145 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 TPPP2P59282 170 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 SSBP2P81877 361 aaPredicted RBP10.68□□□□□ -0.7
ATG9A-220ENST00000475339 TBC1D26Q86UD7 250 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 OR5T1Q8NG75 326 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 OR4D10Q8NGI6 311 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 OR4A5Q8NH83 315 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 MS4A10Q96PG2 267 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 SLA2Q9H6Q3 261 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 PLEKHA2Q9HB19 425 aa10.68□□□□□ -0.7
ATG9A-220ENST00000475339 FAT2Q9NYQ8 4349 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 H3BUA1 57 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 GSTZ1O43708 216 aaPredicted RBP10.67□□□□□ -0.7
ATG9A-220ENST00000475339 IGLV1-51P01701 117 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 TRGV3P03979 118 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 MAS1LP35410 378 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 RPL8P62917 257 aaKnown RBP10.67□□□□□ -0.7
ATG9A-220ENST00000475339 SPANXN2Q5MJ10 180 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 C10orf55Q5SWW7 151 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 OR4A47Q6IF82 309 aa10.67□□□□□ -0.7
ATG9A-220ENST00000475339 FAAP20Q6NZ36 180 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms