RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SRSF12Q8WXF0 261 aaKnown RBP12.59□□□□□ -0.39
GPC1-207ENST00000466624 NOL4LQ96MY1 436 aaPredicted RBP12.59□□□□□ -0.39
GPC1-207ENST00000466624 MDFIQ99750 246 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 FKBP11Q9NYL4 201 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 FBXO7Q9Y3I1 522 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 C15orf61A6NNL5 157 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 IL5P05113 134 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 RPL27AP46776 148 aaKnown RBP12.58□□□□□ -0.4
GPC1-207ENST00000466624 RAB25P57735 213 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 SLC35B1P78383 322 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 CFHR3Q02985 330 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 ANKRD55Q3KP44 614 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 THOC7Q6I9Y2 204 aaKnown RBP12.58□□□□□ -0.4
GPC1-207ENST00000466624 ZNF429Q86V71 674 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 COQ8AQ8NI60 647 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 CASTOR1Q8WTX7 329 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 WFDC12Q8WWY7 111 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 SPIN2AQ99865 258 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 SPIN2BQ9BPZ2 258 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 MARVELD1Q9BSK0 173 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 TMEM14BQ9NUH8 114 aa12.58□□□□□ -0.4
GPC1-207ENST00000466624 FOXA2Q9Y261 457 aaPredicted RBP12.58□□□□□ -0.4
GPC1-207ENST00000466624 TRAV41A0A0B4J266 112 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 PSMB11A5LHX3 300 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 PRAF2O60831 178 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 PPIFP30405 207 aaKnown RBP12.57□□□□□ -0.4
GPC1-207ENST00000466624 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 C12orf54Q6X4T0 127 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 CENPVQ7Z7K6 275 aaPredicted RBP12.57□□□□□ -0.4
GPC1-207ENST00000466624 COMMD1Q8N668 190 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 MINDY2Q8NBR6 621 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 OR5B3Q8NH48 314 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 OR4A16Q8NH70 328 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 RNASE11Q8TAA1 199 aaKnown RBP12.57□□□□□ -0.4
GPC1-207ENST00000466624 GRPEL2Q8TAA5 225 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 ABHD5Q8WTS1 349 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 MITD1Q8WV92 249 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 SRSF8Q9BRL6 282 aaKnown RBP12.57□□□□□ -0.4
GPC1-207ENST00000466624 FAM103A1Q9BTL3 118 aaKnown RBP12.57□□□□□ -0.4
GPC1-207ENST00000466624 COMMD5Q9GZQ3 224 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 PRR13Q9NZ81 148 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 LINC00527Q9UJ94 153 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 ZNF257Q9Y2Q1 563 aa12.57□□□□□ -0.4
GPC1-207ENST00000466624 A0A0G2JRQ6 117 aa12.56□□□□□ -0.4
GPC1-207ENST00000466624 INMT-MINDY4F8WBC2 141 aa12.56□□□□□ -0.4
GPC1-207ENST00000466624 OR2B8PP59922 312 aa12.56□□□□□ -0.4
GPC1-207ENST00000466624 AARDQ4LEZ3 155 aa12.56□□□□□ -0.4
GPC1-207ENST00000466624 C10orf55Q5SWW7 151 aa12.56□□□□□ -0.4
GPC1-207ENST00000466624 LYZL2Q7Z4W2 148 aa12.56□□□□□ -0.4
GPC1-207ENST00000466624 ZNF431Q8TF32 576 aaPredicted RBP12.56□□□□□ -0.4
GPC1-207ENST00000466624 ZNF747Q9BV97 191 aa12.56□□□□□ -0.4
GPC1-207ENST00000466624 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
GPC1-207ENST00000466624 TMED3Q9Y3Q3 217 aa12.56□□□□□ -0.4
GPC1-207ENST00000466624 A0A0B4J293 547 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 TEX50A0A1B0GTY4 177 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 MSGN1A6NI15 193 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 TEX22C9J3V5 150 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 G3V318 75 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 HAX1O00165 279 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 IGHG4P01861 327 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 ECSCRQ19T08 205 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 UNQ5815/PRO19632Q6UWF5 114 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 HSD17B13Q7Z5P4 300 aaPredicted RBP12.55□□□□□ -0.4
GPC1-207ENST00000466624 LFNGQ8NES3 379 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 OR5AU1Q8NGC0 362 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 OR5M8Q8NGP6 311 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 OR1L8Q8NGR8 309 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 GPR146Q96CH1 333 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 PHB2Q99623 299 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 QTRT1Q9BXR0 403 aaKnown RBP12.55□□□□□ -0.4
GPC1-207ENST00000466624 CACFD1Q9UGQ2 172 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 NSG2Q9Y328 171 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 OR51B2Q9Y5P1 312 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 WSB1Q9Y6I7 421 aa12.55□□□□□ -0.4
GPC1-207ENST00000466624 A0A1B0GW64 132 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 CGB1A6NKQ9 187 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 E7EUB6 86 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 BRI3O95415 125 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 DHFRP00374 187 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 IGLV1-40P01703 118 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 ELANEP08246 267 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 SLC25A6P12236 298 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 HSPE1P61604 102 aaKnown RBP12.54□□□□□ -0.4
GPC1-207ENST00000466624 IZUMO4Q1ZYL8 232 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 RGS21Q2M5E4 152 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 ASPHD1Q5U4P2 390 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 TEX38Q6PEX7 206 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 Q6ZRM9 215 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 RNF152Q8N8N0 203 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 OR4X2Q8NGF9 303 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 OR52B4Q8NGK2 314 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 CITED1Q99966 193 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 SEC22CQ9BRL7 303 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 GPN1Q9HCN4 374 aaPredicted RBP12.54□□□□□ -0.4
GPC1-207ENST00000466624 NDUFA4L2Q9NRX3 87 aa12.54□□□□□ -0.4
GPC1-207ENST00000466624 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.54□□□□□ -0.4
GPC1-207ENST00000466624 A0A1B0GU03 582 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 DBX1A6NMT0 343 aa12.53□□□□□ -0.4
GPC1-207ENST00000466624 SNRPGP15A8MWD9 76 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms