RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 LYSMD2Q8IV50 215 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 PLEKHA2Q9HB19 425 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 TMEM140Q9NV12 185 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 SIGLEC8Q9NYZ4 499 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 PEMTQ9UBM1 199 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 NBEAL2Q6ZNJ1 2754 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 HPGDSO60760 199 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 PGLYRP1O75594 196 aaPredicted RBP12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 DEFA4P12838 97 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 HRH1P35367 487 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 LCN12Q6JVE5 192 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 CLEC19AQ6UXS0 136 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 SNX29P2Q8IUI4 249 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 SGPP2Q8IWX5 399 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 CD300LFQ8TDQ1 290 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 GPX8Q8TED1 209 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 CCDC140Q96MF4 163 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 FXYD6Q9H0Q3 95 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 C19orf73Q9NVV2 129 aa12.48□□□□□ -0.41
NCKIPSD-208ENST00000454134 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 IGLC7A0M8Q6 106 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 GGCTO75223 188 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 DHFRP00374 187 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 APOA1P02647 267 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 ELK1P19419 428 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 MECP2P51608 486 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 Q8N402 240 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 OR10W1Q8NGF6 305 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 OR6F1Q8NGZ6 308 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 BORCS5Q969J3 196 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 THAP7Q9BT49 309 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 COMMD5Q9GZQ3 224 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 NAA50Q9GZZ1 169 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 SELENOKQ9Y6D0 94 aa12.47□□□□□ -0.41
NCKIPSD-208ENST00000454134 IGLV11-55A0A075B6I3 123 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 SMIM31A0A1B0GVY4 71 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 MFSD2BA6NFX1 497 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 SMIM18P0DKX4 95 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 F2RP25116 425 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 ARL3P36405 182 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 LPAR6P43657 344 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 CD300EQ496F6 205 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 PHLDA2Q53GA4 152 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 DYNLRB2Q8TF09 96 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 FCAMRQ8WWV6 532 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 EEF1AKMT3Q96AZ1 226 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 ZMAT4Q9H898 229 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 ZC4H2Q9NQZ6 224 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 COMMD9Q9P000 198 aa12.46□□□□□ -0.41
NCKIPSD-208ENST00000454134 C2orf70A6NJV1 201 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 KRASP01116 189 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 FOLR2P14207 255 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 HIST1H1BP16401 226 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 RORCP51449 518 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 ERVK-16P61578 105 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 KLK9Q2XQG4 91 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 ZNF585BQ52M93 769 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 RNASE12Q5GAN4 147 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 FAM209BQ5JX69 171 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 GTSCR1Q86UQ5 136 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 CMTM1Q8IZ96 169 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 DGCR14Q96DF8 476 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 QTRT1Q9BXR0 403 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 KLK9Q9UKQ9 250 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 NSG2Q9Y328 171 aa12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 HUWE1Q7Z6Z7 4374 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-208ENST00000454134 TEX50A0A1B0GTY4 177 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 MARCH11A6NNE9 402 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 A8MZ25 164 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 GPR31O00270 319 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 G6PCP35575 357 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 TSPAN5P62079 268 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 DEFB114Q30KQ6 69 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 CACNG8Q8WXS5 425 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 CMTM3Q96MX0 182 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 TM2D3Q9BRN9 247 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 HINT2Q9BX68 163 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 SCPEP1Q9HB40 452 aa12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 KMT2CQ8NEZ4 4911 aaKnown RBP12.44□□□□□ -0.42
NCKIPSD-208ENST00000454134 ZNF320A2RRD8 509 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 ZNF785A8K8V0 405 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 FAM25AB3EWG3 89 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 FAM25CB3EWG5 89 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 FAM25GB3EWG6 89 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 LGALS9O00182 355 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 CLEC3BP05452 202 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 OR13C7P0DN81 318 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 RCVRNP35243 200 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 CTF1Q16619 201 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 GPR107Q5VW38 600 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 GPHB5Q86YW7 130 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 OR2K2Q8NGT1 345 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 SRSF8Q9BRL6 282 aaKnown RBP12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 TUBA4BQ9H853 241 aa12.43□□□□□ -0.42
NCKIPSD-208ENST00000454134 TRBV7-1A0A0A6YYK4 115 aa12.42□□□□□ -0.42
NCKIPSD-208ENST00000454134 IGHV3-35A0A0C4DH35 117 aa12.42□□□□□ -0.42
NCKIPSD-208ENST00000454134 M0QYG6 137 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms